Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00213
         (777 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   1.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   1.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   3.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.2  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   4.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   7.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   7.3  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 7/27 (25%), Positives = 20/27 (74%)
 Frame = +2

Query: 89  LVESLLGKAQTDYKNKIKKDVVLKVDT 169
           +V+++ G     +KN++++++ +K+DT
Sbjct: 58  IVKAISGVQTVRFKNELERNITIKLDT 84


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 538 GSTGTYISKHLTGKIVRFI 482
           GST TY SKH T +  ++I
Sbjct: 381 GSTETYYSKHNTQQFTQYI 399


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 136 LILVVCLGFSEQGL 95
           L+LVVCLG + QG+
Sbjct: 5   LLLVVCLGIACQGI 18


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 214 CSQGTYQDQQHSGVRLELIAQQLLPE 291
           C QGT  D+ HS  R ++  + L PE
Sbjct: 629 CRQGTVPDETHSACR-DIPEEFLRPE 653


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = -3

Query: 592 GMLRNQKYSGSHDYTFPGGSTGTYISK-HLTGKI 494
           G +R    S  HD    GGS G   SK H+   I
Sbjct: 249 GTIRKCDESSPHDQVIIGGSNGLDTSKVHIIDSI 282


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 223 PGCNQLDSTTGVGRQKVL-GVDFQHNIL 143
           PG  Q+DS+T  GR+     ++F  N L
Sbjct: 530 PGKIQMDSSTNFGREDFWNSINFNENKL 557


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 223 PGCNQLDSTTGVGRQKVL-GVDFQHNIL 143
           PG  Q+DS+T  GR+     ++F  N L
Sbjct: 530 PGKIQMDSSTNFGREDFWNSINFNENKL 557


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,033
Number of Sequences: 438
Number of extensions: 5159
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)