Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00208
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    27   0.15 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.4  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   5.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.7  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 400 YYCHPTYEVSVYTIWSGQPWNRMFGNLTLI 489
           Y+    Y++  Y  W  + W+    NL L+
Sbjct: 61  YFISNVYQILAYNFWKKKYWSEFLANLKLL 90


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 403 YCHPTYEVSVYTIWSGQPWNRMFGNL 480
           YC   Y + V T +  + W R+  NL
Sbjct: 76  YCFNYYVIVVTTFYKRRTWTRLLKNL 101


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 291 EQLLLEGGVPGIAMMREP 238
           EQ+L EGG P +   R+P
Sbjct: 837 EQILAEGGCPNLYDARKP 854


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 232 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 122
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 232 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 122
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 322 QTRRNPEWRMRTT 284
           QTRRNP +R RT+
Sbjct: 226 QTRRNPYYRPRTS 238


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = -1

Query: 702 IVIEFCNVRALML--NMILIITVYKVRNRNNCSINIMFTYNILLQI 571
           +V +F N   + L  N I     +     N  S  ++  YNI+LQ+
Sbjct: 6   VVEKFLNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLILYNIILQV 51


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 598 VYVQHFIADFCLYYIIK*IAFLL 530
           ++  H +   C+YY +  + FLL
Sbjct: 122 IFTVHLLFLLCIYYFVVPLFFLL 144


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = -1

Query: 702 IVIEFCNVRALML--NMILIITVYKVRNRNNCSINIMFTYNILLQI 571
           +V +F N   + L  N I     +     N  S  ++  YNI+LQ+
Sbjct: 24  VVEKFLNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLILYNIILQV 69


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 58  TCSSTHPYTDGNCCPYTALCS 120
           TC   + YT  +C  Y   CS
Sbjct: 84  TCHCPYGYTGKDCGEYVDWCS 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,319
Number of Sequences: 336
Number of extensions: 3601
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)