Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00207
(591 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9BT78 Cluster: COP9 signalosome complex subunit 4; n=3... 101 1e-20
UniRef50_Q4S252 Cluster: Chromosome undetermined SCAF14764, whol... 58 1e-07
UniRef50_Q8L5U0 Cluster: COP9 signalosome complex subunit 4; n=1... 45 0.001
UniRef50_UPI00006CB777 Cluster: Leucine Rich Repeat family prote... 37 0.41
UniRef50_Q5WRT9 Cluster: Putative uncharacterized protein; n=4; ... 37 0.41
UniRef50_Q4PGB5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.54
UniRef50_Q1ZMF2 Cluster: Putative uncharacterized protein; n=2; ... 36 0.94
UniRef50_A7S2B8 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.6
UniRef50_Q9VCE6 Cluster: Probable N6-adenosine-methyltransferase... 35 1.6
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 34 2.2
UniRef50_Q2H5R3 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_A2EAU5 Cluster: Surface antigen BspA-like; n=3; Trichom... 33 3.8
UniRef50_A5KQM2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_A5K248 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_UPI0000F21998 Cluster: PREDICTED: hypothetical protein,... 33 6.6
UniRef50_UPI00006CE926 Cluster: hypothetical protein TTHERM_0056... 33 6.6
UniRef50_Q89AQ0 Cluster: Peptidoglycan synthetase ftsI; n=1; Buc... 33 6.6
UniRef50_Q55DF7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q6CDT5 Cluster: Similar to tr|Q9C2C8 Neurospora crassa ... 32 8.7
>UniRef50_Q9BT78 Cluster: COP9 signalosome complex subunit 4; n=37;
Coelomata|Rep: COP9 signalosome complex subunit 4 - Homo
sapiens (Human)
Length = 406
Score = 101 bits (243), Expect = 1e-20
Identities = 49/95 (51%), Positives = 67/95 (70%)
Frame = +2
Query: 254 DLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLT 433
DL++L NS G HKD A KYR +L + ++ + E E+LKAF+EA+VNENVSLVISRQLLT
Sbjct: 8 DLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEAMVNENVSLVISRQLLT 67
Query: 434 DVSTHLALLADNVSQEVSHFALDVINPELFHLKNR 538
D THL L D+ ++E+ HF L+ I P + + +
Sbjct: 68 DFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQ 102
Score = 52.4 bits (120), Expect = 8e-06
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +1
Query: 508 KPRVISFEEQVASIRQHLADIYERNQNW 591
+PRVISFEEQVASIRQHLA IYE+ ++W
Sbjct: 93 QPRVISFEEQVASIRQHLASIYEKEEDW 120
>UniRef50_Q4S252 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 417
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +2
Query: 374 FIEAIVNENVSLVISRQLLTDVSTHLALLADNVSQEVSHFALDVINPELFHLK---NRWP 544
F +VNENVSLVISRQLLTD THL L D ++ V HF L+ I P + + N +
Sbjct: 6 FFSPVVNENVSLVISRQLLTDFCTHLPNLPDATAKAVYHFTLEKIQPRVISFEEQVNAFT 65
Query: 545 VSDST*QIS 571
+ ST IS
Sbjct: 66 LISSTASIS 74
Score = 33.9 bits (74), Expect = 2.9
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 535 QVASIRQHLADIYERNQNW 591
QVASIRQHLA IYE+ +W
Sbjct: 89 QVASIRQHLATIYEKEGDW 107
>UniRef50_Q8L5U0 Cluster: COP9 signalosome complex subunit 4; n=10;
Magnoliophyta|Rep: COP9 signalosome complex subunit 4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 397
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/80 (31%), Positives = 46/80 (57%)
Frame = +2
Query: 281 GLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLTDVSTHLALL 460
G + + E+Y+ +L +L S + L ++ + FI+ I++++V LV+SRQLL + L L
Sbjct: 12 GDQRQKIEQYKLILSSVLSSND--LLQAQR-FIDHILSDDVPLVVSRQLLQSFAQELGRL 68
Query: 461 ADNVSQEVSHFALDVINPEL 520
+E++ F L I P +
Sbjct: 69 EPETQKEIAQFTLTQIQPRV 88
Score = 39.5 bits (88), Expect = 0.058
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +1
Query: 508 KPRVISFEEQVASIRQHLADIYERNQNW 591
+PRV+SFEEQ IR+ LA +YE Q W
Sbjct: 85 QPRVVSFEEQALVIREKLAGLYESEQEW 112
>UniRef50_UPI00006CB777 Cluster: Leucine Rich Repeat family protein;
n=1; Tetrahymena thermophila SB210|Rep: Leucine Rich
Repeat family protein - Tetrahymena thermophila SB210
Length = 1727
Score = 36.7 bits (81), Expect = 0.41
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 284 LHKDQAEKYRNVLMEI--LKSTEQELSESLKAFIEAIVNENVSLVISRQLLTDVSTHLAL 457
+H+ + Y++ ++ L TE+ L LK I A+++E ++L + QLL +S H+
Sbjct: 979 MHQFSIQNYQSTNNQLWQLSETEKNLQNILKQSINALIDERINLTLKLQLLQLLSVHIQQ 1038
Query: 458 LADNVSQEVSHFALDVINPELFH 526
N + L IN H
Sbjct: 1039 QKQNSTDLEKLLQLTKINQAASH 1061
>UniRef50_Q5WRT9 Cluster: Putative uncharacterized protein; n=4;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1987
Score = 36.7 bits (81), Expect = 0.41
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Frame = +2
Query: 257 LSELRNSGGLHKDQAEKYRNVLME---ILKSTEQELSESLKAFIEAIVNENVSLVISRQL 427
+ E +N+ L KDQ E NVL+E +L+ + E+ A +AI + + L +R
Sbjct: 274 MEESKNAADLFKDQLEAQENVLVEVRKVLQEHQDEMERENLAHADAIKHRDEELAQTRAE 333
Query: 428 LTDVSTHLALLAD---NVSQE 481
L V+ + ++D NVS+E
Sbjct: 334 LVKVTEMMKSMSDVKLNVSEE 354
>UniRef50_Q4PGB5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 597
Score = 36.3 bits (80), Expect = 0.54
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 508 KPRVISFEEQVASIRQHLADIYERNQNW 591
+PRV+SFEEQ +++R LA + E ++W
Sbjct: 130 QPRVLSFEEQASNLRMQLASLLEAEEDW 157
>UniRef50_Q1ZMF2 Cluster: Putative uncharacterized protein; n=2;
Vibrionaceae|Rep: Putative uncharacterized protein -
Vibrio angustum S14
Length = 1028
Score = 35.5 bits (78), Expect = 0.94
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +2
Query: 293 DQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLV-ISRQLLTDVS-THLALLAD 466
D E YRNVL+ +L T Q S + AF + + N+N+ L I+ + + T L +
Sbjct: 136 DAIEAYRNVLLSLLFHTGQCQSAVILAFHQGLSNDNLELKHINNHIYCRLELTSRGLNTN 195
Query: 467 -NVSQEVSHFALDVINPELFHLKNRW 541
NV E H L ++P L +W
Sbjct: 196 CNVEGEKKHIHLAYLHPITLGLLRQW 221
>UniRef50_A7S2B8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 415
Score = 34.7 bits (76), Expect = 1.6
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 290 KDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI---SRQLLTDVSTHLALL 460
KD AEK + + L + E++ESL+ F +EN+ +++ SR++ VS + +
Sbjct: 336 KDAAEKGEDRPITFLCARNDEVAESLREFASLPDDENILVILDIPSRRVF--VSDNDVIT 393
Query: 461 ADNVSQEVSHFALDVINPELFH 526
DN + V+++ D + L H
Sbjct: 394 TDNAREFVNNYLADKLQGRLLH 415
>UniRef50_Q9VCE6 Cluster: Probable N6-adenosine-methyltransferase
MT-A70-like protein; n=6; Coelomata|Rep: Probable
N6-adenosine-methyltransferase MT-A70-like protein -
Drosophila melanogaster (Fruit fly)
Length = 608
Score = 34.7 bits (76), Expect = 1.6
Identities = 21/95 (22%), Positives = 49/95 (51%)
Frame = +2
Query: 254 DLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLT 433
D+ L+ +++ EK + +EIL +++L+ K +EA + ++ Q L+
Sbjct: 6 DIKSLKTKRNTLREKLEKRKKERIEILSDIQEDLTNPKKELVEADLEVQKEVL---QALS 62
Query: 434 DVSTHLALLADNVSQEVSHFALDVINPELFHLKNR 538
S L +++ V ++++ +L+++N L L N+
Sbjct: 63 SCSLALPIVSTQVVEKIAGSSLEMVNFILGKLANQ 97
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 34.3 bits (75), Expect = 2.2
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 520 ISFEEQVASIRQHLADIYERNQNW 591
+SFE+QV IR+ LA++YE Q W
Sbjct: 235 VSFEDQVLVIREKLAELYESEQQW 258
>UniRef50_Q2H5R3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 399
Score = 33.9 bits (74), Expect = 2.9
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 248 SPDLSELRNSGGLHKDQAEKYRNVLMEILKSTEQ--ELSESLKAFIEAIVNENVSLVISR 421
SP ++ G +D Y N+L E KST ++ L AFI+A++ N+ LV +R
Sbjct: 3 SPQVAAALEEAGKSQD-VTGYLNIL-ENTKSTPNPDSVAADLTAFIDAVLTGNLGLVNTR 60
Query: 422 QLLTDVSTHLALLADN 469
L+TD L L DN
Sbjct: 61 TLVTDFIAALRAL-DN 75
>UniRef50_A2EAU5 Cluster: Surface antigen BspA-like; n=3;
Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
- Trichomonas vaginalis G3
Length = 447
Score = 33.5 bits (73), Expect = 3.8
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -1
Query: 471 TLSASSAKCVLTSVKSCLEITRLTFSLTIASMN--AFNDSDNSCSVLFSISIRTL 313
T SA++ K ++ C + ++TFS ++ ++ AFN+ N V+FS S+ T+
Sbjct: 125 TFSAANVKIGESAFSGCSYLNKVTFSSSVTTIGSYAFNNCQNLTEVIFSSSVVTV 179
>UniRef50_A5KQM2 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 1121
Score = 33.1 bits (72), Expect = 5.0
Identities = 19/99 (19%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = +2
Query: 224 NARQFAKCSPDLSELRNSGGLHKDQAEKYRNVLMEILKSTEQEL-SESLKAFIEAIVNEN 400
N + K +L +L L D + ++R ++ + + E+++ ++ + ++ E
Sbjct: 340 NNSDYGKKEQELKDLEYRIALLADNSAQWRQIVKGLKRWEEEDVVTDYVSNRALQLIQEI 399
Query: 401 VSLVISRQLLTDVSTHLALLADNVSQEVSHFALDVINPE 517
++ +L ++ THL L DN++ E+S + + E
Sbjct: 400 RGGALTEKLCKELRTHLDLALDNITNELSELRISIHETE 438
>UniRef50_A5K248 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 708
Score = 33.1 bits (72), Expect = 5.0
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +2
Query: 272 NSGGLHKDQAEKYRNVLMEILKSTEQELSESL----KAFIEAIVNENVSLVISRQLLTDV 439
N G ++ A +N+ ++ILK +E+ E+ K I + E V +++ ++LL ++
Sbjct: 298 NGGSQNEKLANGMKNITLDILKKDTKEMFETFNEENKTLIRKYLIEVVEMLVEKELLYNI 357
Query: 440 STHLALL 460
+H LL
Sbjct: 358 VSHNILL 364
>UniRef50_UPI0000F21998 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Danio rerio|Rep: PREDICTED: hypothetical
protein, partial - Danio rerio
Length = 754
Score = 32.7 bits (71), Expect = 6.6
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 272 NSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAI 388
N+G +++ E Y N L ++ S+EQE S KA +++I
Sbjct: 612 NNGPINEQNFEAYVNTLTDMYNSSEQEYSPECKALLDSI 650
>UniRef50_UPI00006CE926 Cluster: hypothetical protein TTHERM_00560070;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00560070 - Tetrahymena thermophila SB210
Length = 3604
Score = 32.7 bits (71), Expect = 6.6
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +2
Query: 224 NARQFAKCSPDLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENV 403
N+ A + D++ L+N L ++ Y NV+ E+ +S Q+ S++L F++ V
Sbjct: 3061 NSYTQAMMTSDITSLKNMNQLSPLPSQSYMNVMEEVTRSGYQQYSDNLFNFLDLQVQYQY 3120
Query: 404 SLVISRQLL 430
++ ++
Sbjct: 3121 QKIVFNMMI 3129
>UniRef50_Q89AQ0 Cluster: Peptidoglycan synthetase ftsI; n=1;
Buchnera aphidicola (Baizongia pistaciae)|Rep:
Peptidoglycan synthetase ftsI - Buchnera aphidicola
subsp. Baizongia pistaciae
Length = 576
Score = 32.7 bits (71), Expect = 6.6
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Frame = +2
Query: 380 EAIVNENVSLVISRQLLTDVSTHLALLADNVSQE-----VSHFALDVINPELFHLKNRWP 544
E ++N + SLV+++ ++ DVS H AL A ++ ++ VS AL + EL + +++
Sbjct: 327 ETVINTS-SLVVNKHIIHDVSYHHALTASDILKKSSNTGVSRLALSIPISELIDIYSKFE 385
Query: 545 VSDST 559
+ ST
Sbjct: 386 LGKST 390
>UniRef50_Q55DF7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 777
Score = 32.3 bits (70), Expect = 8.7
Identities = 18/61 (29%), Positives = 37/61 (60%)
Frame = -1
Query: 522 NNSGFITSSAKCETSCETLSASSAKCVLTSVKSCLEITRLTFSLTIASMNAFNDSDNSCS 343
++ G+ + +CE++ S+SS K L+S S L I+ ++++S N+F+ S ++CS
Sbjct: 303 SSDGYTGNQVQCESTLT--SSSSIKSSLSS-SSSLNISTSIPRISVSSSNSFSGSPSTCS 359
Query: 342 V 340
+
Sbjct: 360 I 360
>UniRef50_Q6CDT5 Cluster: Similar to tr|Q9C2C8 Neurospora crassa
Probable gamma-adaptin; n=1; Yarrowia lipolytica|Rep:
Similar to tr|Q9C2C8 Neurospora crassa Probable
gamma-adaptin - Yarrowia lipolytica (Candida lipolytica)
Length = 806
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/62 (25%), Positives = 35/62 (56%)
Frame = +2
Query: 302 EKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLTDVSTHLALLADNVSQE 481
+++RN ++E L+ + + A A++NE+ VI R+LLT + + A +V+ +
Sbjct: 343 QRHRNTIVECLRDADVSIRRRALAVAYALINESNVRVIVRELLTFLESADAEFKPSVTAQ 402
Query: 482 VS 487
++
Sbjct: 403 IA 404
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,388,744
Number of Sequences: 1657284
Number of extensions: 7128619
Number of successful extensions: 20557
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20552
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -