Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00207
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   3.4  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   3.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   7.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.8  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 242 KCSPDLSELRNS 277
           KCSPD  EL+N+
Sbjct: 53  KCSPDGQELKNN 64


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 242 KCSPDLSELRNS 277
           KCSPD  EL+N+
Sbjct: 53  KCSPDGQELKNN 64


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 230 GHFNFLIGWIYLSKI 186
           G F FL  W+YL+ I
Sbjct: 4   GSFTFLAIWLYLTAI 18


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +2

Query: 275 SGGLHKDQAEKYRNVLMEILKSTEQELSES 364
           +GG ++ + +    +L +I+  T+Q L E+
Sbjct: 29  AGGENEPRKQDIGEILQQIMNITDQSLDEA 58


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 325 GDTKKYRTRIIR 360
           G+TK+ RTR IR
Sbjct: 218 GETKRQRTRAIR 229


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 362 SLKAFIEAIVNENVSLVISRQLL 430
           S+ +      NEN SLVI+++L+
Sbjct: 69  SVYSLFRIATNENNSLVINKRLI 91


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 362 SLKAFIEAIVNENVSLVISRQLL 430
           S+ +      NEN SLVI+++L+
Sbjct: 69  SVYSLFRIATNENNSLVINKRLI 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,878
Number of Sequences: 336
Number of extensions: 2010
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)