Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00207
         (591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    27   0.45 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.2  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    23   5.6  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    23   5.6  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    23   5.6  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 27.1 bits (57), Expect = 0.45
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 500 QVQSVKPPVKHYQPAVLSVCSHLS 429
           Q+ +V+  VK+Y+P +L +C H S
Sbjct: 674 QLNNVEEHVKNYRPQILVLCGHPS 697


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 200 ISSLLGN*NARQFAKCSPDLSELR 271
           I +L+GN  A+    C PDL  LR
Sbjct: 376 IKALIGNLFAQTIRCCVPDLKSLR 399


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 242 KCSPDLSELRNSGGLHKDQAEKY 310
           KC   +  LRN+ G+H   AE++
Sbjct: 487 KCGLTMQVLRNTVGIHPTVAEEF 509


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 242 KCSPDLSELRNSGGLHKDQAEKY 310
           KC   +  LRN+ G+H   AE++
Sbjct: 463 KCGLTMQVLRNTVGIHPTVAEEF 485


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 242 KCSPDLSELRNSGGLHKDQAEKY 310
           KC   +  LRN+ G+H   AE++
Sbjct: 460 KCGLTMQVLRNTVGIHPTVAEEF 482


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,801
Number of Sequences: 2352
Number of extensions: 7803
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)