Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00207
(591 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004883-1|AAO45239.1| 407|Drosophila melanogaster GH09439p pro... 99 5e-21
AE013599-559|AAF59157.1| 407|Drosophila melanogaster CG8725-PA ... 99 5e-21
AF129082-1|AAD28607.1| 407|Drosophila melanogaster COP9 signalo... 98 7e-21
AY113286-1|AAM29291.1| 608|Drosophila melanogaster AT20169p pro... 35 0.095
AE014297-3437|AAF56221.1| 608|Drosophila melanogaster CG5933-PA... 35 0.095
AY069196-1|AAL39341.1| 397|Drosophila melanogaster GH25458p pro... 29 6.2
AE014296-875|AAF47921.3| 397|Drosophila melanogaster CG32245-PA... 29 6.2
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro... 28 8.2
AY069586-1|AAL39731.1| 1916|Drosophila melanogaster LD32687p pro... 28 8.2
AE014134-2071|AAF53101.1| 1916|Drosophila melanogaster CG6509-PB... 28 8.2
AE014134-2070|AAF53102.1| 1916|Drosophila melanogaster CG6509-PA... 28 8.2
>BT004883-1|AAO45239.1| 407|Drosophila melanogaster GH09439p
protein.
Length = 407
Score = 98.7 bits (235), Expect = 5e-21
Identities = 47/94 (50%), Positives = 67/94 (71%)
Frame = +2
Query: 257 LSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLTD 436
L L N G HKDQA+KYR +L +L +T QEL + L+ F+EAIVNE+VSLVISRQ+L D
Sbjct: 16 LMGLINFTGTHKDQADKYRQLLKTVLTNTGQELIDGLRLFVEAIVNEHVSLVISRQILND 75
Query: 437 VSTHLALLADNVSQEVSHFALDVINPELFHLKNR 538
V + L+ L D++S+ +SHF L+ +NP + + +
Sbjct: 76 VGSELSKLPDDLSKMLSHFTLEKVNPRVISFEEQ 109
Score = 52.0 bits (119), Expect = 6e-07
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 511 PRVISFEEQVASIRQHLADIYERNQNW 591
PRVISFEEQVA IR HLA+IYERNQ W
Sbjct: 101 PRVISFEEQVAGIRFHLANIYERNQQW 127
>AE013599-559|AAF59157.1| 407|Drosophila melanogaster CG8725-PA
protein.
Length = 407
Score = 98.7 bits (235), Expect = 5e-21
Identities = 47/94 (50%), Positives = 67/94 (71%)
Frame = +2
Query: 257 LSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLTD 436
L L N G HKDQA+KYR +L +L +T QEL + L+ F+EAIVNE+VSLVISRQ+L D
Sbjct: 16 LMGLINFTGTHKDQADKYRQLLKTVLTNTGQELIDGLRLFVEAIVNEHVSLVISRQILND 75
Query: 437 VSTHLALLADNVSQEVSHFALDVINPELFHLKNR 538
V + L+ L D++S+ +SHF L+ +NP + + +
Sbjct: 76 VGSELSKLPDDLSKMLSHFTLEKVNPRVISFEEQ 109
Score = 52.0 bits (119), Expect = 6e-07
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 511 PRVISFEEQVASIRQHLADIYERNQNW 591
PRVISFEEQVA IR HLA+IYERNQ W
Sbjct: 101 PRVISFEEQVAGIRFHLANIYERNQQW 127
>AF129082-1|AAD28607.1| 407|Drosophila melanogaster COP9
signalosome subunit 4 CSN4 protein.
Length = 407
Score = 98.3 bits (234), Expect = 7e-21
Identities = 46/91 (50%), Positives = 66/91 (72%)
Frame = +2
Query: 266 LRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLTDVST 445
L N G HKDQA+KYR +L +L +T QEL + L+ F+EAIVNE+VSLVISRQ+L DV +
Sbjct: 19 LINFTGTHKDQADKYRQLLKTVLTNTGQELIDGLRLFVEAIVNEHVSLVISRQILNDVGS 78
Query: 446 HLALLADNVSQEVSHFALDVINPELFHLKNR 538
L+ L D++S+ +SHF L+ +NP + + +
Sbjct: 79 ELSKLPDDLSKMLSHFTLEKVNPRVISFEEQ 109
Score = 52.0 bits (119), Expect = 6e-07
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 511 PRVISFEEQVASIRQHLADIYERNQNW 591
PRVISFEEQVA IR HLA+IYERNQ W
Sbjct: 101 PRVISFEEQVAGIRFHLANIYERNQQW 127
>AY113286-1|AAM29291.1| 608|Drosophila melanogaster AT20169p
protein.
Length = 608
Score = 34.7 bits (76), Expect = 0.095
Identities = 21/95 (22%), Positives = 49/95 (51%)
Frame = +2
Query: 254 DLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLT 433
D+ L+ +++ EK + +EIL +++L+ K +EA + ++ Q L+
Sbjct: 6 DIKSLKTKRNTLREKLEKRKKERIEILSDIQEDLTNPKKELVEADLEVQKEVL---QALS 62
Query: 434 DVSTHLALLADNVSQEVSHFALDVINPELFHLKNR 538
S L +++ V ++++ +L+++N L L N+
Sbjct: 63 SCSLALPIVSTQVVEKIAGSSLEMVNFILGKLANQ 97
>AE014297-3437|AAF56221.1| 608|Drosophila melanogaster CG5933-PA
protein.
Length = 608
Score = 34.7 bits (76), Expect = 0.095
Identities = 21/95 (22%), Positives = 49/95 (51%)
Frame = +2
Query: 254 DLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLT 433
D+ L+ +++ EK + +EIL +++L+ K +EA + ++ Q L+
Sbjct: 6 DIKSLKTKRNTLREKLEKRKKERIEILSDIQEDLTNPKKELVEADLEVQKEVL---QALS 62
Query: 434 DVSTHLALLADNVSQEVSHFALDVINPELFHLKNR 538
S L +++ V ++++ +L+++N L L N+
Sbjct: 63 SCSLALPIVSTQVVEKIAGSSLEMVNFILGKLANQ 97
>AY069196-1|AAL39341.1| 397|Drosophila melanogaster GH25458p
protein.
Length = 397
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 260 SELRNSGG-LHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 415
S + N GG + + ++YRN +M+I + ++E+S+ + ++ +V+LVI
Sbjct: 27 SMVSNGGGSVAMQRDDEYRNRIMKIRRLADEEISDKASTCGKLLIFLSVALVI 79
>AE014296-875|AAF47921.3| 397|Drosophila melanogaster CG32245-PA,
isoform A protein.
Length = 397
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 260 SELRNSGG-LHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 415
S + N GG + + ++YRN +M+I + ++E+S+ + ++ +V+LVI
Sbjct: 27 SMVSNGGGSVAMQRDDEYRNRIMKIRRLADEEISDKASTCGKLLIFLSVALVI 79
>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
protein.
Length = 1286
Score = 28.3 bits (60), Expect = 8.2
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Frame = -1
Query: 483 TSCETLSASSAKCVLTSVK-------SCLEITRLTFSLTIASMNAFNDSDNSCSVLFSIS 325
TS +TLS ++AK VL K +CL +TR+T+ L+IA+ + + S+L
Sbjct: 153 TSVDTLSPNTAKAVLELQKRCRADKLACLSLTRVTY-LSIANDLQEVEEPDRASILHDTD 211
Query: 324 IRTLRYFSA*SLCKPPEFLNSLKSGEHFA 238
+ A S P E L +L+ G+ A
Sbjct: 212 LLVAPNSPAES--SPDEELMALQLGKKLA 238
>AY069586-1|AAL39731.1| 1916|Drosophila melanogaster LD32687p
protein.
Length = 1916
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Frame = +2
Query: 245 CSPDLSELRNSGGLHKDQAEKYRNVLMEILKST---EQELSESLKAFIEAIVNENVSLVI 415
CS L+EL+ + + EKY+ +E+ K + E+ K ++ ++++ V+
Sbjct: 175 CSEKLAELKKERNMVAVEREKYKKSYIELEKDRNYYRERGDENQK--LKVLLSQESKNVL 232
Query: 416 SRQLLTDVSTHLALLADNVSQEVSHFALDVI--NPELFHLK 532
S LT+ L DNV QE + D++ N E+ LK
Sbjct: 233 S---LTEELNQLLSEKDNVLQEHQKMSDDLVLANKEIERLK 270
>AE014134-2071|AAF53101.1| 1916|Drosophila melanogaster CG6509-PB,
isoform B protein.
Length = 1916
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Frame = +2
Query: 245 CSPDLSELRNSGGLHKDQAEKYRNVLMEILKST---EQELSESLKAFIEAIVNENVSLVI 415
CS L+EL+ + + EKY+ +E+ K + E+ K ++ ++++ V+
Sbjct: 175 CSEKLAELKKERNMVAVEREKYKKSYIELEKDRNYYRERGDENQK--LKVLLSQESKNVL 232
Query: 416 SRQLLTDVSTHLALLADNVSQEVSHFALDVI--NPELFHLK 532
S LT+ L DNV QE + D++ N E+ LK
Sbjct: 233 S---LTEELNQLLSEKDNVLQEHQKMSDDLVLANKEIERLK 270
>AE014134-2070|AAF53102.1| 1916|Drosophila melanogaster CG6509-PA,
isoform A protein.
Length = 1916
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Frame = +2
Query: 245 CSPDLSELRNSGGLHKDQAEKYRNVLMEILKST---EQELSESLKAFIEAIVNENVSLVI 415
CS L+EL+ + + EKY+ +E+ K + E+ K ++ ++++ V+
Sbjct: 175 CSEKLAELKKERNMVAVEREKYKKSYIELEKDRNYYRERGDENQK--LKVLLSQESKNVL 232
Query: 416 SRQLLTDVSTHLALLADNVSQEVSHFALDVI--NPELFHLK 532
S LT+ L DNV QE + D++ N E+ LK
Sbjct: 233 S---LTEELNQLLSEKDNVLQEHQKMSDDLVLANKEIERLK 270
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,188,192
Number of Sequences: 53049
Number of extensions: 337400
Number of successful extensions: 1000
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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