Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00206
(742 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX511262-2|CAM45793.1| 601|Homo sapiens HLA-B associated transc... 47 6e-05
BX248244-2|CAM26084.1| 601|Homo sapiens HLA-B associated transc... 47 6e-05
BX248244-1|CAM26083.1| 264|Homo sapiens HLA-B associated transc... 47 6e-05
BC031839-1|AAH31839.1| 558|Homo sapiens HLA-B associated transc... 47 6e-05
BA000025-23|BAB63383.1| 558|Homo sapiens BAT5 protein. 47 6e-05
AL805934-43|CAI18530.1| 558|Homo sapiens HLA-B associated trans... 47 6e-05
AL805934-42|CAO03670.1| 264|Homo sapiens HLA-B associated trans... 47 6e-05
AL670886-34|CAI17808.2| 601|Homo sapiens HLA-B associated trans... 47 6e-05
AL670886-33|CAM25029.1| 264|Homo sapiens HLA-B associated trans... 47 6e-05
AL662899-18|CAI18401.2| 601|Homo sapiens HLA-B associated trans... 47 6e-05
AL662899-17|CAM25666.1| 264|Homo sapiens HLA-B associated trans... 47 6e-05
AK023194-1|BAB14455.1| 558|Homo sapiens protein ( Homo sapiens ... 47 6e-05
AF193047-1|AAG22475.1| 558|Homo sapiens unknown protein. 47 6e-05
AF129756-9|AAD18079.1| 558|Homo sapiens BAT5 protein. 47 6e-05
>BX511262-2|CAM45793.1| 601|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 601
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 187 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 246
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 247 PCQITSYLVAHTLGRRMLYPGSVYLL 272
Score = 43.6 bits (98), Expect = 8e-04
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 257 KIGERTLATAYTAIRIGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMR 436
K + LA A I YY++P Y+ ++G+LS+ +V + G + + +R
Sbjct: 98 KHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLR 157
Query: 437 AYGRSYSPKYLKFIDTLDS 493
GR +P+Y +FI L++
Sbjct: 158 GIGRWTNPQYRQFITILEA 176
>BX248244-2|CAM26084.1| 601|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 601
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 187 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 246
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 247 PCQITSYLVAHTLGRRMLYPGSVYLL 272
Score = 43.6 bits (98), Expect = 8e-04
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 257 KIGERTLATAYTAIRIGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMR 436
K + LA A I YY++P Y+ ++G+LS+ +V + G + + +R
Sbjct: 98 KHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLR 157
Query: 437 AYGRSYSPKYLKFIDTLDS 493
GR +P+Y +FI L++
Sbjct: 158 GIGRWTNPQYRQFITILEA 176
>BX248244-1|CAM26083.1| 264|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 264
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 111 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 170
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 171 PCQITSYLVAHTLGRRMLYPGSVYLL 196
>BC031839-1|AAH31839.1| 558|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 558
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 144 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 203
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 204 PCQITSYLVAHTLGRRMLYPGSVYLL 229
Score = 43.6 bits (98), Expect = 8e-04
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 257 KIGERTLATAYTAIRIGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMR 436
K + LA A I YY++P Y+ ++G+LS+ +V + G + + +R
Sbjct: 55 KHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLR 114
Query: 437 AYGRSYSPKYLKFIDTLDS 493
GR +P+Y +FI L++
Sbjct: 115 GIGRWTNPQYRQFITILEA 133
>BA000025-23|BAB63383.1| 558|Homo sapiens BAT5 protein.
Length = 558
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 144 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 203
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 204 PCQITSYLVAHTLGRRMLYPGSVYLL 229
Score = 43.6 bits (98), Expect = 8e-04
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 257 KIGERTLATAYTAIRIGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMR 436
K + LA A I YY++P Y+ ++G+LS+ +V + G + + +R
Sbjct: 55 KHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLR 114
Query: 437 AYGRSYSPKYLKFIDTLDS 493
GR +P+Y +FI L++
Sbjct: 115 GIGRWTNPQYRQFITILEA 133
>AL805934-43|CAI18530.1| 558|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 558
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 144 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 203
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 204 PCQITSYLVAHTLGRRMLYPGSVYLL 229
Score = 43.6 bits (98), Expect = 8e-04
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 257 KIGERTLATAYTAIRIGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMR 436
K + LA A I YY++P Y+ ++G+LS+ +V + G + + +R
Sbjct: 55 KHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLR 114
Query: 437 AYGRSYSPKYLKFIDTLDS 493
GR +P+Y +FI L++
Sbjct: 115 GIGRWTNPQYRQFITILEA 133
>AL805934-42|CAO03670.1| 264|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 264
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 111 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 170
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 171 PCQITSYLVAHTLGRRMLYPGSVYLL 196
>AL670886-34|CAI17808.2| 601|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 601
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 187 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 246
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 247 PCQITSYLVAHTLGRRMLYPGSVYLL 272
Score = 43.6 bits (98), Expect = 8e-04
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 257 KIGERTLATAYTAIRIGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMR 436
K + LA A I YY++P Y+ ++G+LS+ +V + G + + +R
Sbjct: 98 KHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLR 157
Query: 437 AYGRSYSPKYLKFIDTLDS 493
GR +P+Y +FI L++
Sbjct: 158 GIGRWTNPQYRQFITILEA 176
>AL670886-33|CAM25029.1| 264|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 264
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 111 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 170
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 171 PCQITSYLVAHTLGRRMLYPGSVYLL 196
>AL662899-18|CAI18401.2| 601|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 601
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 187 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 246
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 247 PCQITSYLVAHTLGRRMLYPGSVYLL 272
Score = 43.6 bits (98), Expect = 8e-04
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 257 KIGERTLATAYTAIRIGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMR 436
K + LA A I YY++P Y+ ++G+LS+ +V + G + + +R
Sbjct: 98 KHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLR 157
Query: 437 AYGRSYSPKYLKFIDTLDS 493
GR +P+Y +FI L++
Sbjct: 158 GIGRWTNPQYRQFITILEA 176
>AL662899-17|CAM25666.1| 264|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 264
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 111 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 170
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 171 PCQITSYLVAHTLGRRMLYPGSVYLL 196
>AK023194-1|BAB14455.1| 558|Homo sapiens protein ( Homo sapiens
cDNA FLJ13132 fis, clone NT2RP3003008. ).
Length = 558
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 144 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 203
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 204 PCQITSYLVAHTLGRRMLYPGSVYLL 229
Score = 43.6 bits (98), Expect = 8e-04
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 257 KIGERTLATAYTAIRIGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMR 436
K + LA A I YY++P Y+ ++G+LS+ +V + G + + +R
Sbjct: 55 KHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLR 114
Query: 437 AYGRSYSPKYLKFIDTLDS 493
GR +P+Y +FI L++
Sbjct: 115 GIGRWTNPQYRQFITILEA 133
>AF193047-1|AAG22475.1| 558|Homo sapiens unknown protein.
Length = 558
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 144 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 203
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 204 PCQITSYLVAHTLGRRMLYPGSVYLL 229
Score = 43.6 bits (98), Expect = 8e-04
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 257 KIGERTLATAYTAIRIGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMR 436
K + LA A I YY++P Y+ ++G+LS+ +V + G + + +R
Sbjct: 55 KHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLR 114
Query: 437 AYGRSYSPKYLKFIDTLDS 493
GR +P+Y +FI L++
Sbjct: 115 GIGRWTNPQYRQFITILEA 133
>AF129756-9|AAD18079.1| 558|Homo sapiens BAT5 protein.
Length = 558
Score = 47.2 bits (107), Expect = 6e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = +1
Query: 520 KAIRKYDFDFSAWPVTFT-ADPEERQES----------WLQNHPFAK-CANMDLPVYQRV 663
+ + Y+FDF +WPV F +P R+ES L+ P + A+ L +++
Sbjct: 144 RQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKL 203
Query: 664 IIQILAFIAAHTFGIRLIYPGSLFLI 741
QI +++ AHT G R++YPGS++L+
Sbjct: 204 PCQITSYLVAHTLGRRMLYPGSVYLL 229
Score = 43.6 bits (98), Expect = 8e-04
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 257 KIGERTLATAYTAIRIGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMR 436
K + LA A I YY++P Y+ ++G+LS+ +V + G + + +R
Sbjct: 55 KHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLR 114
Query: 437 AYGRSYSPKYLKFIDTLDS 493
GR +P+Y +FI L++
Sbjct: 115 GIGRWTNPQYRQFITILEA 133
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,231,277
Number of Sequences: 237096
Number of extensions: 2251493
Number of successful extensions: 8208
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8194
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -