Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00205
(335 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 139 4e-34
03_01_0547 + 4093196-4093657,4094267-4095148 139 4e-34
03_01_0544 + 4082528-4082989,4083585-4084466 139 4e-34
03_01_0543 + 4076981-4077442,4078145-4079026 139 4e-34
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 84 2e-17
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 84 2e-17
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 54 4e-08
02_04_0462 + 23131433-23132836 38 0.003
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 37 0.004
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 35 0.019
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 34 0.025
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 33 0.076
03_05_0511 + 25056018-25059107 32 0.13
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 32 0.13
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.18
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.23
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.23
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 0.31
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 0.40
01_06_0662 + 30987187-30987277,30987825-30990214 30 0.53
02_04_0148 - 20198407-20201424 29 0.93
10_08_0016 + 14127200-14127615,14127723-14127816,14127904-141280... 29 1.2
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 28 1.6
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 2.2
07_01_0714 - 5451246-5451408,5453401-5453534,5453608-5453796,545... 27 3.8
04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019 27 3.8
07_03_1015 + 23307700-23307906,23309274-23309483,23309915-233100... 27 5.0
12_02_1174 - 26696869-26698191 26 6.6
04_04_1139 + 31173271-31173462,31173928-31174087,31174318-311744... 26 6.6
02_05_0564 + 30003817-30005778 26 6.6
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 26 8.7
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 26 8.7
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 26 8.7
01_06_1505 + 37827495-37827977,37828424-37828914,37828997-37829819 26 8.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 139 bits (337), Expect = 4e-34
Identities = 66/73 (90%), Positives = 67/73 (91%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 57.2 bits (132), Expect = 3e-09
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIK 334
IALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIK 100
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 139 bits (337), Expect = 4e-34
Identities = 66/73 (90%), Positives = 67/73 (91%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 57.2 bits (132), Expect = 3e-09
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIK 334
IALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIK 100
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 139 bits (337), Expect = 4e-34
Identities = 66/73 (90%), Positives = 67/73 (91%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 57.2 bits (132), Expect = 3e-09
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIK 334
IALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIK 100
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 139 bits (337), Expect = 4e-34
Identities = 66/73 (90%), Positives = 67/73 (91%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 57.2 bits (132), Expect = 3e-09
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIK 334
IALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIK 100
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 84.2 bits (199), Expect = 2e-17
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +3
Query: 51 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 230
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 231 ERELGITI 254
ERE G+T+
Sbjct: 306 ERERGVTM 313
Score = 34.7 bits (76), Expect = 0.019
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFI 331
+A+ ET KY V ++D+PGH+DF+
Sbjct: 315 VAVAYLETKKYRVVLLDSPGHKDFV 339
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 84.2 bits (199), Expect = 2e-17
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +3
Query: 51 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 230
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 231 ERELGITI 254
ERE G+T+
Sbjct: 306 ERERGVTM 313
Score = 34.7 bits (76), Expect = 0.019
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFI 331
+A+ ET KY V ++D+PGH+DF+
Sbjct: 315 VAVAYLETKKYRVVLLDSPGHKDFV 339
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 53.6 bits (123), Expect = 4e-08
Identities = 23/57 (40%), Positives = 39/57 (68%)
Frame = +3
Query: 84 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITI 254
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER G T+
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTV 60
>02_04_0462 + 23131433-23132836
Length = 467
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 33 KMGKEKTHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 191
K + K H+NI IGHVD GK+T T L + GG + ++ + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
Score = 26.2 bits (55), Expect = 6.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDFIK 334
++ET + +D PGH D++K
Sbjct: 127 EYETETRHYAHVDCPGHADYVK 148
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 37.1 bits (82), Expect = 0.004
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 180 MGKGSFKYAWVLDKLKAERELGITI 254
+GKGSF YAW +D+ ERE GIT+
Sbjct: 276 IGKGSFAYAWAMDESADERERGITM 300
Score = 34.3 bits (75), Expect = 0.025
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFI 331
F+T Y+V ++D+PGH+DF+
Sbjct: 307 FDTKNYHVVLLDSPGHKDFV 326
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 34.7 bits (76), Expect = 0.019
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 42 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 191
+ K H+N+ IGHVD GK+T T ++ + G ++ +K +E +G
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
Score = 29.1 bits (62), Expect = 0.93
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDFIK 334
++ET+K + +D PGH D++K
Sbjct: 124 EYETAKRHYAHVDCPGHADYVK 145
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 34.3 bits (75), Expect = 0.025
Identities = 26/65 (40%), Positives = 31/65 (47%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 240 LGITI 254
GIT+
Sbjct: 103 RGITV 107
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 32.7 bits (71), Expect = 0.076
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
NI + H+DSGK+T T ++Y G R E E ++ G G+ +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 119
Query: 240 LGITI 254
GITI
Sbjct: 120 KGITI 124
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 287 YYVTIIDAPGHRDF 328
Y V IID PGH DF
Sbjct: 136 YQVNIIDTPGHVDF 149
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.13
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCG 131
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 31.9 bits (69), Expect = 0.13
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
N +I H+D GKST L+ G + KR EM K F LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 240 LGITIILLSGSSKLASTMLP-SLMLLDT 320
GITI L + + P L L+DT
Sbjct: 123 RGITIKLQAARMRYIMNDEPYCLNLIDT 150
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.18
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCG 131
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 9 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 131
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 281 SKYYVTIIDAPGHRDF 328
++Y + +ID+PGH DF
Sbjct: 96 NEYLINLIDSPGHVDF 111
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 9 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 131
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 281 SKYYVTIIDAPGHRDF 328
++Y + +ID+PGH DF
Sbjct: 96 NEYLINLIDSPGHVDF 111
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 54 HINIVVIGHVDSGKSTTTGHLIYKCG 131
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 0.40
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 131
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDF 328
K + + Y + +ID+PGH DF
Sbjct: 92 KRDGNSYLINLIDSPGHIDF 111
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 0.53
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 131
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 281 SKYYVTIIDAPGHRDF 328
++Y + +ID+PGH DF
Sbjct: 96 NEYLINLIDSPGHVDF 111
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 29.1 bits (62), Expect = 0.93
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 182
N ++ HVD GK++ HLI G ++R E+ A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
>10_08_0016 +
14127200-14127615,14127723-14127816,14127904-14128033,
14128113-14128245,14128342-14128549,14128683-14128838
Length = 378
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 195 FKYAWVLDKLKAERELGITIILLSGSSKLASTMLP 299
F Y W+ ++++ E+ G+ I GSSK+ ST P
Sbjct: 332 FTYFWIKEQIEKEKTQGVDIAGY-GSSKVVSTQAP 365
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFI 331
FET TI+DAPGH+ ++
Sbjct: 26 FETETTRFTILDAPGHKSYV 45
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 48 KTHINIVVIGHVDSG 92
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>07_01_0714 -
5451246-5451408,5453401-5453534,5453608-5453796,
5454313-5454825,5455815-5456856,5457283-5457380,
5458224-5458451
Length = 788
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 162 EKEAQEMGKGSFKYAWVLDKLKAERELGITIILLSGSSKLASTMLPSLMLLDTEISS 332
++E E+ K S + +LD L AER + + L + +LAS L TEI++
Sbjct: 164 DQEPSEIQKWSADFPDMLDVLLAERRVDEALDALDEAERLASDAKLKQTLTATEIAA 220
>04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019
Length = 508
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 189 GSFKYAWVLDKLKAERELGITIILLSGSSKLAS 287
G + W+ DK+ +R GIT++L+ SS LAS
Sbjct: 78 GQLVFGWLGDKMGRKRVYGITLLLMVVSS-LAS 109
>07_03_1015 +
23307700-23307906,23309274-23309483,23309915-23310085,
23310163-23310286,23310753-23310814,23311185-23311266,
23311870-23312009
Length = 331
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 216 DKLKAERELGITIILLSGSSKLASTM 293
DK+KA RE G+T++ +K+ STM
Sbjct: 297 DKIKALREAGVTVV--ESPAKIGSTM 320
>12_02_1174 - 26696869-26698191
Length = 440
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 141 KRTIEKFEKEAQEMGK 188
KR EK EKEAQEMG+
Sbjct: 371 KRKEEKREKEAQEMGR 386
>04_04_1139 +
31173271-31173462,31173928-31174087,31174318-31174487,
31174566-31174788,31175053-31175207
Length = 299
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 158 VREGGPGNG*RILQICLGIGQTKG*A*AWYHNHIALWK 271
+++GGPG G + + I T AWY H++ K
Sbjct: 137 LKKGGPGKGPSTGGVIINISATLHYTAAWYQIHVSAAK 174
>02_05_0564 + 30003817-30005778
Length = 653
Score = 26.2 bits (55), Expect = 6.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -3
Query: 144 VCQYHHICRSSDQWWW 97
V Y H+C +WWW
Sbjct: 564 VLTYMHLCAEDWRWWW 579
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 30 PKMGKEKTHINIVVIGHVDSGKST 101
P++ + INI IGHV GKST
Sbjct: 52 PEVISRQATINIGTIGHVAHGKST 75
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 243 QAHAQPLVCPIPKHI*RILYPFPGPPSRTS 154
+A A+P + P+P+ +PFP P R +
Sbjct: 350 RARARPSIPPLPRRACPSSWPFPTSPKRAA 379
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 181 WVKDPSNMLGYWTN*RLS 234
W+ PS+ +GYW N +S
Sbjct: 876 WISSPSSGVGYWGNSEMS 893
>01_06_1505 + 37827495-37827977,37828424-37828914,37828997-37829819
Length = 598
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 228 AERELGITIILLSGSSKLASTMLPSLMLLDTEISSR 335
++R +T + LS S +L LPS+ + EIS R
Sbjct: 60 SKRRRALTALSLSLSPELIRVQLPSVAIAGVEISER 95
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,975,505
Number of Sequences: 37544
Number of extensions: 170306
Number of successful extensions: 464
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -