Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00205
         (335 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    24   1.8  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   4.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   5.4  

>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 242 WYHNHIALWKFETSKYYVTIIDAPG 316
           W       W +E  K+  T+I+ PG
Sbjct: 479 WIRQFEFRWNYEDYKFRTTVINMPG 503


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +3

Query: 198 KYAWVLDKLKAERELGITIILLSGSSKLASTMLPSL 305
           KYAW L   K +R +   I  L  SSK  S ML +L
Sbjct: 188 KYAWALPMHKKQRSMYDLIGQLVQSSK--SPMLQTL 221


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 141 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 236
           KR I +FE E  +      K+    D LKAER
Sbjct: 319 KRKIGEFEVERDQAAGILAKHDETYDALKAER 350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,854
Number of Sequences: 2352
Number of extensions: 6004
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23774685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)