Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00205
(335 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 153 4e-38
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 153 4e-38
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 153 4e-38
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 153 4e-38
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 7e-34
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 88 1e-18
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 88 1e-18
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 83 6e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 36 0.005
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 36 0.005
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 36 0.005
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 36 0.007
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.039
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.067
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.067
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 32 0.089
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.21
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.21
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 0.63
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 0.63
AC084196-7|AAK29949.2| 284|Caenorhabditis elegans Hypothetical ... 29 0.83
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.1
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 29 1.1
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 29 1.1
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 26 5.8
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 26 5.8
Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical pr... 26 7.7
AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical ... 26 7.7
AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily a... 26 7.7
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 153 bits (370), Expect = 4e-38
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 59.3 bits (137), Expect = 7e-10
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIK 334
IALWKFET+KYY+TIIDAPGHRDFIK
Sbjct: 75 IALWKFETAKYYITIIDAPGHRDFIK 100
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 153 bits (370), Expect = 4e-38
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 59.3 bits (137), Expect = 7e-10
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIK 334
IALWKFET+KYY+TIIDAPGHRDFIK
Sbjct: 75 IALWKFETAKYYITIIDAPGHRDFIK 100
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 153 bits (370), Expect = 4e-38
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 59.3 bits (137), Expect = 7e-10
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIK 334
IALWKFET+KYY+TIIDAPGHRDFIK
Sbjct: 75 IALWKFETAKYYITIIDAPGHRDFIK 100
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 153 bits (370), Expect = 4e-38
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 59.3 bits (137), Expect = 7e-10
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIK 334
IALWKFET+KYY+TIIDAPGHRDFIK
Sbjct: 75 IALWKFETAKYYITIIDAPGHRDFIK 100
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 7e-34
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAER 236
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 88.2 bits (209), Expect = 1e-18
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +3
Query: 45 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 224
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 225 KAERELGITI 254
+ ERE G+T+
Sbjct: 227 EEERERGVTM 236
Score = 32.7 bits (71), Expect = 0.067
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFI 331
FETS + ++DAPGH+DFI
Sbjct: 243 FETSHRRIVLLDAPGHKDFI 262
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 88.2 bits (209), Expect = 1e-18
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +3
Query: 45 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 224
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 225 KAERELGITI 254
+ ERE G+T+
Sbjct: 245 EEERERGVTM 254
Score = 32.7 bits (71), Expect = 0.067
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFI 331
FETS + ++DAPGH+DFI
Sbjct: 261 FETSHRRIVLLDAPGHKDFI 280
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 82.6 bits (195), Expect = 6e-17
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +3
Query: 39 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 218
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 219 KLKAERELGITI 254
ERE G T+
Sbjct: 164 TNDEEREKGKTV 175
Score = 33.5 bits (73), Expect = 0.039
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFI 331
FET K + TI+DAPGH+ F+
Sbjct: 182 FETEKRHFTILDAPGHKSFV 201
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 36.3 bits (80), Expect = 0.005
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 42 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 212
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 213 LDKLKAER 236
L+ A+R
Sbjct: 105 LEYETAKR 112
Score = 29.9 bits (64), Expect = 0.47
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDFIK 334
++ET+K + ID PGH D+IK
Sbjct: 106 EYETAKRHYAHIDCPGHADYIK 127
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 36.3 bits (80), Expect = 0.005
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 42 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 212
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 213 LDKLKAER 236
L+ A+R
Sbjct: 106 LEYETAKR 113
Score = 29.9 bits (64), Expect = 0.47
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDFIK 334
++ET+K + ID PGH D+IK
Sbjct: 107 EYETAKRHYAHIDCPGHADYIK 128
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 36.3 bits (80), Expect = 0.005
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 42 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 212
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 213 LDKLKAER 236
L+ A+R
Sbjct: 106 LEYETAKR 113
Score = 29.9 bits (64), Expect = 0.47
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDFIK 334
++ET+K + ID PGH D+IK
Sbjct: 107 EYETAKRHYAHIDCPGHADYIK 128
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 35.9 bits (79), Expect = 0.007
Identities = 27/65 (41%), Positives = 33/65 (50%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 240 LGITI 254
GIT+
Sbjct: 74 RGITV 78
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.5 bits (73), Expect = 0.039
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
NI + H+DSGK+T T ++Y G ID + +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 240 LGITI 254
GITI
Sbjct: 96 RGITI 100
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.067
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 131
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.067
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 131
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.3 bits (70), Expect = 0.089
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 176
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.21
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 12 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 122
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.21
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 12 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 122
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 0.63
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 138 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 0.63
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 138 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AC084196-7|AAK29949.2| 284|Caenorhabditis elegans Hypothetical
protein Y55D5A.6 protein.
Length = 284
Score = 29.1 bits (62), Expect = 0.83
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Frame = -2
Query: 328 EISVSRSINDGNIVLASFELPESNMIVIPSSRSAFSL------SNTQAYLK--DPLPISW 173
EI + I + ++L +F+LP+ +M ++P+ + + +N Q L DP+ W
Sbjct: 38 EIGIENLIQEHELILGNFQLPKISMHILPAGEESLTTKTQNFEANEQKVLNVGDPIMFEW 97
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 57 INIVVIGHVDSGKSTTT 107
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 57 INIVVIGHVDSGKSTTT 107
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 48 KTHINIVVIGHVDSGKSTTT 107
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 48 KTHINIVVIGHVDSGKSTTT 107
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
+I+ GH+D S GH +K GI E FE E ++ + + + ERE
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691
Query: 240 LGI 248
L +
Sbjct: 1692 LAM 1694
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 26.2 bits (55), Expect = 5.8
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 30 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 188
PK +EK I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 26.2 bits (55), Expect = 5.8
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 30 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 188
PK +EK I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 26.2 bits (55), Expect = 5.8
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 30 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 188
PK +EK I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical
protein F56H9.4 protein.
Length = 390
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 42 KEKTHINIVVIGHVDSGKSTTTGHL-IYKCGG 134
++K + +++IG +SGKST + I CGG
Sbjct: 40 RKKKALKLLIIGPGESGKSTIVKQVRILHCGG 71
>AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical
protein F52H2.7 protein.
Length = 875
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 198 KYAWVLDKLKAERELGITIILLSGSSKL 281
K + +DKL ER++G+ +L S S KL
Sbjct: 271 KPIFTIDKLPGERQIGLGSLLTSRSIKL 298
>AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily
assigned gene nameprotein 123 protein.
Length = 655
Score = 25.8 bits (54), Expect = 7.7
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = -3
Query: 135 YHHICRSSDQWWW 97
Y H+C WWW
Sbjct: 570 YFHLCAEDYHWWW 582
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,428,950
Number of Sequences: 27780
Number of extensions: 136521
Number of successful extensions: 478
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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