Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00205
(335 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 152 1e-39
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 152 1e-39
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 61 4e-12
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 61 4e-12
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.19
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.43
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 22 1.7
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 2.3
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 4.0
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 4.0
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 4.0
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 4.0
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 152 bits (369), Expect = 1e-39
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 59.7 bits (138), Expect = 9e-12
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIK 334
IALWKFET+KYYVTIIDAPGHRDFIK
Sbjct: 75 IALWKFETAKYYVTIIDAPGHRDFIK 100
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 152 bits (369), Expect = 1e-39
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 60.9 bits (141), Expect = 4e-12
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIK 334
IALWKFETSKYYVTIIDAPGHRDFIK
Sbjct: 75 IALWKFETSKYYVTIIDAPGHRDFIK 100
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 60.9 bits (141), Expect = 4e-12
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIK 334
IALWKFETSKYYVTIIDAPGHRDFIK
Sbjct: 2 IALWKFETSKYYVTIIDAPGHRDFIK 27
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 60.9 bits (141), Expect = 4e-12
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIK 334
IALWKFETSKYYVTIIDAPGHRDFIK
Sbjct: 18 IALWKFETSKYYVTIIDAPGHRDFIK 43
Score = 34.3 bits (75), Expect = 4e-04
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 207 WVLDKLKAERELGITI 254
WVLDKLKAERE GITI
Sbjct: 1 WVLDKLKAERERGITI 16
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.19
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 48 KTHINIVVIGHVDSGKST 101
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
Score = 22.2 bits (45), Expect = 1.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 293 VTIIDAPGHRDFI 331
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.43
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 57 INIVVIGHVDSGKST 101
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.2 bits (45), Expect = 1.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 256 MIVIPSSRSAFSLSNTQAYLKDPLPISWASFSN 158
M+ + ++RS F L N +KD L ++ F+N
Sbjct: 72 MVGLYATRSPFLLLNDPELIKDILIRDFSKFAN 104
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 2.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 49 FSLPIFG*SRITNCV 5
FSLPIFG I +C+
Sbjct: 57 FSLPIFGTRWIFSCI 71
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 138 DKRTIEKFEKEAQEMG 185
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 138 DKRTIEKFEKEAQEMG 185
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 4.0
Identities = 9/46 (19%), Positives = 22/46 (47%)
Frame = -2
Query: 259 NMIVIPSSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPHL 122
N +V+ + + + +N K P P ++ ++V S+P ++
Sbjct: 613 NCVVVEETIPSLNSTNVTLSTKCPYPSYYSYIGVLTLVATSMPTYI 658
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 138 DKRTIEKFEKEAQEMG 185
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,735
Number of Sequences: 438
Number of extensions: 1575
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7591023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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