Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00203
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   3.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.8  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 153 PTGRISSGGRXCAWRLYRAGASTRCR 230
           PTG  + GG  C W  Y   +S   R
Sbjct: 511 PTGDGALGGEVCMWGEYVDDSSVESR 536


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 274 VVASTFSTWDPRIPW 230
           ++A  ++TWDP+ P+
Sbjct: 281 ILAQLWATWDPQSPF 295


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = -1

Query: 555 LRDKYGRTSTTGPYGTTCRPNNQLDLKEK*CDHTFQAADRSR 430
           L DKY R     P    CRP      +   CD   + ADR +
Sbjct: 487 LCDKYYRCVHGKPTEFACRPGTVFHTQSNICDWP-EHADREK 527


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = +1

Query: 580 QENQEGEEATPQRNRPQVVSGQMFYKPIGNYTPV*ITNAIK 702
           + + E +  T   +  Q   G  +Y+ I N+T      A+K
Sbjct: 515 RRDDEADVKTEDLDEIQKEKGDEYYETISNHTDASSAKAVK 555


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = +1

Query: 580 QENQEGEEATPQRNRPQVVSGQMFYKPIGNYTPV*ITNAIK 702
           + + E +  T   +  Q   G  +Y+ I N+T      A+K
Sbjct: 515 RRDDEADVKTEDLDEIQKEKGDEYYETISNHTDASSAKAVK 555


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = +1

Query: 580 QENQEGEEATPQRNRPQVVSGQMFYKPIGNYTPV*ITNAIK 702
           + + E +  T   +  Q   G  +Y+ I N+T      A+K
Sbjct: 515 RRDDEADVKTEDLDEIQKEKGDEYYETISNHTDASSAKAVK 555


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = +1

Query: 580 QENQEGEEATPQRNRPQVVSGQMFYKPIGNYTPV*ITNAIK 702
           + + E +  T   +  Q   G  +Y+ I N+T      A+K
Sbjct: 515 RRDDEADVKTEDLDEIQKEKGDEYYETISNHTDASSAKAVK 555


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 453 MCDHITFPLGQAGYSVYK 506
           +CD +   +G+  YSV K
Sbjct: 287 LCDKVQLKIGEIKYSVNK 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,782
Number of Sequences: 336
Number of extensions: 3333
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)