Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00201
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.8  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   9.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 580 PMFIVKAYLPVNESFGFT 633
           P F      P+N SF FT
Sbjct: 629 PTFTALGLFPINGSFAFT 646


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 166 TMLPKPVRFGALAPRVPAPT 225
           T  P+P +     PR P PT
Sbjct: 252 TPKPRPTKVSRRKPRPPRPT 271


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 703 GGPANGRIRTAGRP 662
           GGP N  +R+ G P
Sbjct: 82  GGPVNDDVRSPGTP 95


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 703 GGPANGRIRTAGRP 662
           GGP N  +R+ G P
Sbjct: 238 GGPVNDDVRSPGTP 251


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 254 LNSFGAIHQDVGAGTLGAKAPNLTGFG 174
           +N+    +Q  G   +G  AP+   FG
Sbjct: 330 MNNMAGTYQMTGYSAMGMAAPHHQNFG 356


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 221  GAGTLGAKAPNLTGF 177
            G G+ G+K+P + GF
Sbjct: 1119 GPGSTGSKSPPVAGF 1133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,816
Number of Sequences: 336
Number of extensions: 4464
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)