Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00200
         (753 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8WR50 Cluster: Star; n=1; Bombyx mori|Rep: Star - Bomb...   177   2e-43
UniRef50_Q7PND5 Cluster: ENSANGP00000010398; n=2; Culicidae|Rep:...    45   0.002
UniRef50_UPI0000D56FAA Cluster: PREDICTED: similar to Protein St...    43   0.007
UniRef50_P42519 Cluster: Protein Star; n=3; Sophophora|Rep: Prot...    42   0.022
UniRef50_Q6EBB9 Cluster: Major early-transcribed protein 53; n=3...    38   0.20 
UniRef50_Q4QBH8 Cluster: Putative uncharacterized protein; n=1; ...    36   0.81 
UniRef50_A0LJI4 Cluster: Transposase-like; n=2; Syntrophobacter ...    35   2.5  
UniRef50_Q294Y8 Cluster: GA19959-PA; n=1; Drosophila pseudoobscu...    35   2.5  
UniRef50_UPI0000EBEDB8 Cluster: PREDICTED: similar to apolipopro...    34   3.3  
UniRef50_Q2SGY9 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  
UniRef50_A7RI52 Cluster: Predicted protein; n=1; Nematostella ve...    33   7.6  

>UniRef50_Q8WR50 Cluster: Star; n=1; Bombyx mori|Rep: Star - Bombyx
           mori (Silk moth)
          Length = 315

 Score =  177 bits (432), Expect = 2e-43
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = +1

Query: 256 EEPGQAMDKPPEPKPNLIDKLVIIFAETKTHSPRFTLPAFMKAPPNELYRRLLPAMLFVL 435
           EEPGQAMDKPPEPKPNLIDKLVIIFAETKTHSPRFTLPAFMKAPPNELYRRLLPAMLFVL
Sbjct: 24  EEPGQAMDKPPEPKPNLIDKLVIIFAETKTHSPRFTLPAFMKAPPNELYRRLLPAMLFVL 83

Query: 436 TFVTVMTMLLIYMDTVALGAQQFR 507
           TFVTVMTMLLIYMDTVALGAQQFR
Sbjct: 84  TFVTVMTMLLIYMDTVALGAQQFR 107



 Score =  173 bits (420), Expect = 5e-42
 Identities = 82/82 (100%), Positives = 82/82 (100%)
 Frame = +3

Query: 507 LNMTRDYELARIGQGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELYNGT 686
           LNMTRDYELARIGQGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELYNGT
Sbjct: 108 LNMTRDYELARIGQGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELYNGT 167

Query: 687 FVEWMASGGRWQSTSYLESARG 752
           FVEWMASGGRWQSTSYLESARG
Sbjct: 168 FVEWMASGGRWQSTSYLESARG 189



 Score = 52.0 bits (119), Expect = 2e-05
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +2

Query: 188 MQGIENKVIMAEKTDQDNPPPP 253
           MQGIENKVIMAEKTDQDNPPPP
Sbjct: 1   MQGIENKVIMAEKTDQDNPPPP 22


>UniRef50_Q7PND5 Cluster: ENSANGP00000010398; n=2; Culicidae|Rep:
           ENSANGP00000010398 - Anopheles gambiae str. PEST
          Length = 300

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 18/36 (50%), Positives = 28/36 (77%)
 Frame = +1

Query: 400 YRRLLPAMLFVLTFVTVMTMLLIYMDTVALGAQQFR 507
           +R+LLP  L +++F TV+++L+IYMDT  +  QQFR
Sbjct: 6   FRQLLPVTLCIISFATVLSILIIYMDTTEIRHQQFR 41



 Score = 37.5 bits (83), Expect = 0.35
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +3

Query: 486 IRSATVPLNMTRDYELARIGQGSAALIAYVRQLHL 590
           IR     LNM+RDY+L  + Q + AL+ YVR +H+
Sbjct: 35  IRHQQFRLNMSRDYDLMGVPQDNPALVKYVRDIHM 69


>UniRef50_UPI0000D56FAA Cluster: PREDICTED: similar to Protein Star;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           Protein Star - Tribolium castaneum
          Length = 322

 Score = 43.2 bits (97), Expect = 0.007
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +1

Query: 376 MKAPPN-ELYRRLLPAMLFVLTFVTVMTMLLIYMDTVALGAQQFR 507
           M APP   + R++LP   F + F  VMT+L++YMD  A+   QFR
Sbjct: 40  MTAPPTPNIIRKILPLAAFSVAFAIVMTVLILYMDNTAMRHYQFR 84



 Score = 43.2 bits (97), Expect = 0.007
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
 Frame = +3

Query: 477 HSCIRSATVPLNMTRDYELARIGQGSAALIAYVRQLHLTARSKP-----QDVVTTPTEQV 641
           ++ +R     +NM++DYEL  + Q +  LI Y+R++H+    +P     +   T P E  
Sbjct: 75  NTAMRHYQFRVNMSQDYELLSVSQDNPQLITYIREVHMQPAIEPHHKPLESQATGPPEDT 134

Query: 642 KVLDSIFGEELYNGTFVEWMA-SGGRWQSTSYLESARG 752
             +  +   +  +G FVE  A S G+   T +LE   G
Sbjct: 135 AYVLKLLNNK-RDGVFVESGAYSDGKTSKTEWLEKKLG 171


>UniRef50_P42519 Cluster: Protein Star; n=3; Sophophora|Rep: Protein
           Star - Drosophila melanogaster (Fruit fly)
          Length = 597

 Score = 41.5 bits (93), Expect = 0.022
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +1

Query: 400 YRRLLPAMLFVLTFVTVMTMLLIYMDTVALGAQQFR 507
           YR+LLP  L +L+F  V   L++YMDT  +  QQFR
Sbjct: 277 YRQLLPIALCLLSFAAVFATLIVYMDTTEIRHQQFR 312



 Score = 37.9 bits (84), Expect = 0.27
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = +3

Query: 486 IRSATVPLNMTRDYELARIGQGSAALIAYVRQLHL 590
           IR     LNM+RDYEL  + Q   ALI ++RQ+H+
Sbjct: 306 IRHQQFRLNMSRDYELNGVAQDDPALIDFLRQIHM 340


>UniRef50_Q6EBB9 Cluster: Major early-transcribed protein 53; n=3;
           Nucleopolyhedrovirus|Rep: Major early-transcribed
           protein 53 - Trichoplusia ni SNPV
          Length = 382

 Score = 38.3 bits (85), Expect = 0.20
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = +1

Query: 274 MDKPPEPKPNLIDKLVIIFAETKTHSPRFTLPAFMKAPPNELYRRLLPAMLFVL 435
           M    E KP LID L+ I  ET+ ++P +  P  +++PP +L  + L  + + L
Sbjct: 15  MSSKTERKPMLIDHLMNIVRETRANNPDYRQPPIIQSPPKDLRPKFLSHLNYCL 68


>UniRef50_Q4QBH8 Cluster: Putative uncharacterized protein; n=1;
            Leishmania major|Rep: Putative uncharacterized protein -
            Leishmania major
          Length = 2199

 Score = 36.3 bits (80), Expect = 0.81
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = -1

Query: 735  DSWCFAIVHQKPSTPQMC-HCTIPLQKWNPKPSPAL*VW*QHLEVWNEQSNVVV*HRRSM 559
            DS   ++ H +P TP  C H  +P+   + +P  +  V     E W+  S+V V  RR++
Sbjct: 975  DSAPVSVSHTRPPTPAECGHDFVPVSTESVRPMLSRGV---SAEAWSAASSVEVAARRAV 1031

Query: 558  LPSPDLYEPAHSHGSCLAEL 499
             P PD Y   H+  S  AEL
Sbjct: 1032 TPDPD-YSSCHT--SMYAEL 1048


>UniRef50_A0LJI4 Cluster: Transposase-like; n=2; Syntrophobacter
           fumaroxidans MPOB|Rep: Transposase-like -
           Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
          Length = 586

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
 Frame = +3

Query: 453 DDALNLHGHSCIRSATVPLNMTRDYELARIGQGSAALIAYVRQLH-----LTARSKPQDV 617
           D  +  H  +C+ + T    +      A IGQ +A  +  +R LH        +SKPQ +
Sbjct: 498 DGKIRCHIFTCMAALTYLRVLENRLAQAGIGQTAAVAMESMRNLHSCLCWYAGKSKPQWM 557

Query: 618 VTTPTEQVKVLDSIFGEELYNG 683
           +  PTE    +   FG ++ +G
Sbjct: 558 IEEPTEDQSAILRAFGHKIASG 579


>UniRef50_Q294Y8 Cluster: GA19959-PA; n=1; Drosophila
            pseudoobscura|Rep: GA19959-PA - Drosophila pseudoobscura
            (Fruit fly)
          Length = 1312

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -1

Query: 615  HLEVWNEQSNVVV*HRRSMLPSP-DLYEPAHSHGSCL-AELLRS*CNCVH 472
            H  +W  Q ++   HRR M P+P DL   A    S L    L S CNCVH
Sbjct: 1046 HQNLWYRQQSMQEMHRRHMTPTPIDLSSNAPILTSSLRTRYLHSICNCVH 1095


>UniRef50_UPI0000EBEDB8 Cluster: PREDICTED: similar to apolipoprotein
            B, partial; n=1; Bos taurus|Rep: PREDICTED: similar to
            apolipoprotein B, partial - Bos taurus
          Length = 3530

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 722  LPSSTRSHPLHKCAIVQFLSKNGIQNLHLL 633
            LPS  + HP  KC+I+ F  K+  Q LHL+
Sbjct: 1745 LPSPPKEHPDXKCSILIFKQKHNFQTLHLI 1774


>UniRef50_Q2SGY9 Cluster: Putative uncharacterized protein; n=1;
           Hahella chejuensis KCTC 2396|Rep: Putative
           uncharacterized protein - Hahella chejuensis (strain
           KCTC 2396)
          Length = 65

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +1

Query: 268 QAMDKPPEPKPNLIDKLVIIFAETKTHSPRFTLPAFMKAPPNE---LYRRL 411
           Q+   P +     I + +  +A    H PR  LPAF  APPN+   LYR +
Sbjct: 4   QSQKSPQDIADEAIRRYLPEYAPDLAHRPRGRLPAFANAPPNDCKRLYRNM 54


>UniRef50_A7RI52 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 4697

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 268  QAMDKPPEPKPNLIDKLVIIFAETKTHSPRFTLPAFMKAPPNE 396
            +A D  P PK   I K+V++  +   H+PRF+   ++ + P E
Sbjct: 1363 KAEDGGPTPKYAAITKVVVLVGDVNDHAPRFSSSQYLASVPYE 1405


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,138,980
Number of Sequences: 1657284
Number of extensions: 15625660
Number of successful extensions: 40766
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 38834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40755
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)