Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00200
         (753 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128348-1|BAC87394.1|  129|Homo sapiens protein ( Homo sapiens ...    31   3.4  
U81556-1|AAB39318.1|   74|Homo sapiens hypothetical protein A4 p...    30   7.8  

>AK128348-1|BAC87394.1|  129|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46490 fis, clone THYMU3027540. ).
          Length = 129

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 560 IDRLCQTTTFDCSFQTSRCCYHTYRAGEGFGFHFWRGIVQWHIC 691
           I  +C   T  C +QT  C YHT+     + +H +  +   HIC
Sbjct: 15  ITHICMYITHICVYQTHVCVYHTHM----YVYHTYMYVYHTHIC 54


>U81556-1|AAB39318.1|   74|Homo sapiens hypothetical protein A4
           protein.
          Length = 74

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -1

Query: 702 PSTP-QMCHCTIPLQKWNPKPSPAL*VW 622
           P+TP Q CH  +P + ++ KPS  L +W
Sbjct: 29  PATPPQQCHSHLPQRSYSAKPSQGLFLW 56


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,077,070
Number of Sequences: 237096
Number of extensions: 2507553
Number of successful extensions: 5691
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5691
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)