Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00200
(753 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L31886-1|AAB04161.1| 597|Drosophila melanogaster Star protein. 42 0.001
AY113201-1|AAM29206.1| 597|Drosophila melanogaster AT04225p pro... 42 0.001
AE014134-192|AAN10478.1| 597|Drosophila melanogaster CG4385-PB,... 42 0.001
AE014134-191|AAF51425.1| 597|Drosophila melanogaster CG4385-PA,... 42 0.001
BT015305-1|AAT94533.1| 1256|Drosophila melanogaster AT15166p pro... 32 0.73
AY058520-1|AAL13749.1| 1256|Drosophila melanogaster LD22771p pro... 32 0.73
AE014297-1371|AAN13524.1| 1256|Drosophila melanogaster CG6923-PB... 32 0.73
AE014297-1370|AAF54693.1| 1256|Drosophila melanogaster CG6923-PA... 32 0.73
BT029138-1|ABJ17071.1| 371|Drosophila melanogaster RE06164p pro... 30 2.9
AY061290-1|AAL28838.1| 384|Drosophila melanogaster LD20458p pro... 30 2.9
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 30 2.9
>L31886-1|AAB04161.1| 597|Drosophila melanogaster Star protein.
Length = 597
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 400 YRRLLPAMLFVLTFVTVMTMLLIYMDTVALGAQQFR 507
YR+LLP L +L+F V L++YMDT + QQFR
Sbjct: 277 YRQLLPIALCLLSFAAVFATLIVYMDTTEIRHQQFR 312
Score = 37.9 bits (84), Expect = 0.015
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 486 IRSATVPLNMTRDYELARIGQGSAALIAYVRQLHL 590
IR LNM+RDYEL + Q ALI ++RQ+H+
Sbjct: 306 IRHQQFRLNMSRDYELNGVAQDDPALIDFLRQIHM 340
>AY113201-1|AAM29206.1| 597|Drosophila melanogaster AT04225p
protein.
Length = 597
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 400 YRRLLPAMLFVLTFVTVMTMLLIYMDTVALGAQQFR 507
YR+LLP L +L+F V L++YMDT + QQFR
Sbjct: 277 YRQLLPIALCLLSFAAVFATLIVYMDTTEIRHQQFR 312
Score = 37.9 bits (84), Expect = 0.015
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 486 IRSATVPLNMTRDYELARIGQGSAALIAYVRQLHL 590
IR LNM+RDYEL + Q ALI ++RQ+H+
Sbjct: 306 IRHQQFRLNMSRDYELNGVAQDDPALIDFLRQIHM 340
>AE014134-192|AAN10478.1| 597|Drosophila melanogaster CG4385-PB,
isoform B protein.
Length = 597
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 400 YRRLLPAMLFVLTFVTVMTMLLIYMDTVALGAQQFR 507
YR+LLP L +L+F V L++YMDT + QQFR
Sbjct: 277 YRQLLPIALCLLSFAAVFATLIVYMDTTEIRHQQFR 312
Score = 37.9 bits (84), Expect = 0.015
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 486 IRSATVPLNMTRDYELARIGQGSAALIAYVRQLHL 590
IR LNM+RDYEL + Q ALI ++RQ+H+
Sbjct: 306 IRHQQFRLNMSRDYELNGVAQDDPALIDFLRQIHM 340
>AE014134-191|AAF51425.1| 597|Drosophila melanogaster CG4385-PA,
isoform A protein.
Length = 597
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 400 YRRLLPAMLFVLTFVTVMTMLLIYMDTVALGAQQFR 507
YR+LLP L +L+F V L++YMDT + QQFR
Sbjct: 277 YRQLLPIALCLLSFAAVFATLIVYMDTTEIRHQQFR 312
Score = 37.9 bits (84), Expect = 0.015
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 486 IRSATVPLNMTRDYELARIGQGSAALIAYVRQLHL 590
IR LNM+RDYEL + Q ALI ++RQ+H+
Sbjct: 306 IRHQQFRLNMSRDYELNGVAQDDPALIDFLRQIHM 340
>BT015305-1|AAT94533.1| 1256|Drosophila melanogaster AT15166p protein.
Length = 1256
Score = 32.3 bits (70), Expect = 0.73
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 615 HLEVWNEQSNVVV*HRRSMLPSP-DLYEPAHSHGSCLAE-LLRS*CNCVH 472
H +W Q ++ HRR M P+P DL A S L L S C+CVH
Sbjct: 990 HQNLWYRQQSMQEMHRRHMTPTPIDLSSNAPLLTSTLRNGYLHSICSCVH 1039
>AY058520-1|AAL13749.1| 1256|Drosophila melanogaster LD22771p protein.
Length = 1256
Score = 32.3 bits (70), Expect = 0.73
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 615 HLEVWNEQSNVVV*HRRSMLPSP-DLYEPAHSHGSCLAE-LLRS*CNCVH 472
H +W Q ++ HRR M P+P DL A S L L S C+CVH
Sbjct: 990 HQNLWYRQQSMQEMHRRHMTPTPIDLSSNAPLLTSTLRNGYLHSICSCVH 1039
>AE014297-1371|AAN13524.1| 1256|Drosophila melanogaster CG6923-PB,
isoform B protein.
Length = 1256
Score = 32.3 bits (70), Expect = 0.73
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 615 HLEVWNEQSNVVV*HRRSMLPSP-DLYEPAHSHGSCLAE-LLRS*CNCVH 472
H +W Q ++ HRR M P+P DL A S L L S C+CVH
Sbjct: 990 HQNLWYRQQSMQEMHRRHMTPTPIDLSSNAPLLTSTLRNGYLHSICSCVH 1039
>AE014297-1370|AAF54693.1| 1256|Drosophila melanogaster CG6923-PA,
isoform A protein.
Length = 1256
Score = 32.3 bits (70), Expect = 0.73
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 615 HLEVWNEQSNVVV*HRRSMLPSP-DLYEPAHSHGSCLAE-LLRS*CNCVH 472
H +W Q ++ HRR M P+P DL A S L L S C+CVH
Sbjct: 990 HQNLWYRQQSMQEMHRRHMTPTPIDLSSNAPLLTSTLRNGYLHSICSCVH 1039
>BT029138-1|ABJ17071.1| 371|Drosophila melanogaster RE06164p
protein.
Length = 371
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = -1
Query: 558 LPSPDLYEPAHSHGSCLAELLRS*CNCVHVN*EH---RHDSHKCQNE 427
+ SP L PA SH CL ++ +S C CV EH + DS K + +
Sbjct: 265 MKSPILNNPAFSHSKCLPKIHKS-CFCVRFIAEHTKMQEDSTKVKED 310
>AY061290-1|AAL28838.1| 384|Drosophila melanogaster LD20458p
protein.
Length = 384
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = -1
Query: 558 LPSPDLYEPAHSHGSCLAELLRS*CNCVHVN*EH---RHDSHKCQNE 427
+ SP L PA SH CL ++ +S C CV EH + DS K + +
Sbjct: 278 MKSPILNNPAFSHSKCLPKIHKS-CFCVRFIAEHTKMQEDSTKVKED 323
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = -1
Query: 558 LPSPDLYEPAHSHGSCLAELLRS*CNCVHVN*EH---RHDSHKCQNE 427
+ SP L PA SH CL ++ +S C CV EH + DS K + +
Sbjct: 462 MKSPILNNPAFSHSKCLPKIHKS-CFCVRFIAEHTKMQEDSTKVKED 507
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,748,137
Number of Sequences: 53049
Number of extensions: 784688
Number of successful extensions: 1926
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1926
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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