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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00198
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81125-2|CAD56600.1|  507|Caenorhabditis elegans Hypothetical pr...    57   1e-08
Z81125-1|CAB03382.1|  501|Caenorhabditis elegans Hypothetical pr...    57   1e-08
Z46794-3|CAA86783.1|  429|Caenorhabditis elegans Hypothetical pr...    51   7e-07
U64862-6|AAB52623.3|  560|Caenorhabditis elegans Temporarily ass...    46   3e-05
Z81526-4|CAB04267.2|  430|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    37   0.013
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction...    36   0.022
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction...    36   0.022
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ...    33   0.16 
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.    33   0.16 
AC024792-3|AAF60684.2|  388|Caenorhabditis elegans Hypothetical ...    32   0.36 
Z32683-13|CAA83630.1|  386|Caenorhabditis elegans Hypothetical p...    32   0.47 
U40426-2|AAP40526.1|  536|Caenorhabditis elegans Diacylglycerol ...    30   1.4  
AC024757-4|AAK68429.2|  371|Caenorhabditis elegans Methionine am...    30   1.4  
Z71180-6|CAI79160.1|  702|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z71180-5|CAD44114.1|  363|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z71180-4|CAA94893.2|  723|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AL021475-7|CAI79248.1|  702|Caenorhabditis elegans Hypothetical ...    29   4.4  
AL021475-6|CAD44157.1|  363|Caenorhabditis elegans Hypothetical ...    29   4.4  
AL021475-5|CAA16314.2|  723|Caenorhabditis elegans Hypothetical ...    29   4.4  
AF178536-1|AAD56365.1|  723|Caenorhabditis elegans EGL-9 protein.      29   4.4  
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z22177-12|CAA80152.1|  974|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z19155-5|CAA79562.1|  974|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U41625-3|AAA83326.1|  264|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AL110490-8|CAB54444.2|  602|Caenorhabditis elegans Hypothetical ...    28   5.8  
AF025379-1|AAC14017.1|  602|Caenorhabditis elegans acetylcholine...    28   5.8  
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha...    28   5.8  
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha...    28   5.8  
AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical...    28   7.7  

>Z81125-2|CAD56600.1|  507|Caenorhabditis elegans Hypothetical
           protein T22A3.4b protein.
          Length = 507

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +3

Query: 306 EQPFAYVLSSKEQGNRCDNCLEKV----KLLKCSGCQFVYYCGRSCQKDAWGDHKWECPN 473
           E PFA  + + +    C NCL       KLL+C GC F  YC + CQ  AW  HK EC  
Sbjct: 33  ETPFATQVLNPKVSEFCANCLRGPAPGEKLLRCGGCNFSMYCSKECQATAWLVHKPECKR 92

Query: 474 LKRVAPKV 497
           LK   P +
Sbjct: 93  LKASFPNL 100


>Z81125-1|CAB03382.1|  501|Caenorhabditis elegans Hypothetical
           protein T22A3.4a protein.
          Length = 501

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +3

Query: 306 EQPFAYVLSSKEQGNRCDNCLEKV----KLLKCSGCQFVYYCGRSCQKDAWGDHKWECPN 473
           E PFA  + + +    C NCL       KLL+C GC F  YC + CQ  AW  HK EC  
Sbjct: 33  ETPFATQVLNPKVSEFCANCLRGPAPGEKLLRCGGCNFSMYCSKECQATAWLVHKPECKR 92

Query: 474 LKRVAPKV 497
           LK   P +
Sbjct: 93  LKASFPNL 100


>Z46794-3|CAA86783.1|  429|Caenorhabditis elegans Hypothetical
           protein R06F6.4 protein.
          Length = 429

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = +3

Query: 300 LSEQPFAYVLSSKEQGNRCDNCLEKV-KLLKCSGCQFVYYCGRSCQKDAWGDHKWECPNL 476
           L E  +A+ L+  +  + C+ CL  + +L KCS C+ + YC + CQ+  W  HK EC  +
Sbjct: 8   LHENVYAFALARDQVESYCNQCLTSMAELKKCSACRRLAYCSQECQRADWKLHKVECKAI 67

Query: 477 K 479
           K
Sbjct: 68  K 68


>U64862-6|AAB52623.3|  560|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 226 protein.
          Length = 560

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = +3

Query: 312 PFAYVLSSKEQGNRCDNCLEKVKLLKCSGCQFVYYCGRSCQKDAWGDHKWECPNLKR 482
           PFAY L    + + C  CL +   L C  C+   +C + C+     DHK+EC  LK+
Sbjct: 27  PFAYSLLDCTKDDYCWTCLGENVELTCEQCKVAKFCSKQCETSGAIDHKYECGPLKK 83


>Z81526-4|CAB04267.2|  430|Caenorhabditis elegans Hypothetical
           protein F33H2.7 protein.
          Length = 430

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
 Frame = +3

Query: 306 EQPFAYVLSSKEQGNRCDNCL------EKVKLLKCSGCQFVYYCGRSCQKDAWGD-HKWE 464
           EQP A VLS +     C  C       ++ ++L C  C  V YC   CQ+  W   H++E
Sbjct: 7   EQPLAAVLSPQFSELYCATCFLEIDSSQETEILTCDDCLAVSYCTLKCQRKDWKSCHQFE 66

Query: 465 CPNLK 479
           C  L+
Sbjct: 67  CEILR 71


>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
           protein F07A11.4 protein.
          Length = 1095

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 321 YVLSSKEQGNRCDNCLEKVKLLKCSGCQFVYYCGRSCQKDAW--GDHKWECPNLK 479
           Y  ++K   + C N   K+KL  C  C    YC + CQ   W  G H+ EC   K
Sbjct: 708 YRKNTKHACHECGN--SKLKLKACEECYDAVYCSKECQVANWSTGGHREECSKRK 760


>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
            molecule protein1, isoform d protein.
          Length = 1439

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
 Frame = +3

Query: 294  LLLSEQPFAYVLSSKEQGNRCDNC-----LEKVKL--LKCSGCQFVYYCGRSCQKDAWGD 452
            +L S +   ++L ++E   RC  C     L   +L  + C  C + YYC R C+ + W +
Sbjct: 1220 VLKSPERAEHILQNEELFVRCTECHRTRELSAARLFFVSCKHC-YTYYCSRECRHNNWPN 1278

Query: 453  HKWEC 467
            H   C
Sbjct: 1279 HSGRC 1283


>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
            molecule protein1, isoform a protein.
          Length = 1480

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
 Frame = +3

Query: 294  LLLSEQPFAYVLSSKEQGNRCDNC-----LEKVKL--LKCSGCQFVYYCGRSCQKDAWGD 452
            +L S +   ++L ++E   RC  C     L   +L  + C  C + YYC R C+ + W +
Sbjct: 1261 VLKSPERAEHILQNEELFVRCTECHRTRELSAARLFFVSCKHC-YTYYCSRECRHNNWPN 1319

Query: 453  HKWEC 467
            H   C
Sbjct: 1320 HSGRC 1324


>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
           protein.
          Length = 1829

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
 Frame = +3

Query: 333 SKEQGNRCDNCLEKVKLLKCSGC--QFVYYCGRSCQKDAWGDHKWECPNLKRVAPKVIPD 506
           +K+    C  C E   LL C  C   F  YC      +   +  W CP  + V P+   +
Sbjct: 313 AKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVKPEHKIE 372

Query: 507 GHECWQ 524
              CW+
Sbjct: 373 KILCWR 378


>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
          Length = 1829

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
 Frame = +3

Query: 333 SKEQGNRCDNCLEKVKLLKCSGC--QFVYYCGRSCQKDAWGDHKWECPNLKRVAPKVIPD 506
           +K+    C  C E   LL C  C   F  YC      +   +  W CP  + V P+   +
Sbjct: 313 AKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVKPEHKIE 372

Query: 507 GHECWQ 524
              CW+
Sbjct: 373 KILCWR 378


>AC024792-3|AAF60684.2|  388|Caenorhabditis elegans Hypothetical
           protein Y48G1A.3 protein.
          Length = 388

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +3

Query: 354 CDNCLEKVKLLKCSGCQFVYYCGRSCQKDAWGDHKWECPNLK 479
           C  C       +C+ C+  Y C + CQK  W  HK  C  LK
Sbjct: 321 CSVCGHPGAKKRCTQCKLAY-CSQECQKFDWPIHKKVCSFLK 361


>Z32683-13|CAA83630.1|  386|Caenorhabditis elegans Hypothetical
           protein R07E5.10a protein.
          Length = 386

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 387 KCSGCQFVYYCGRSCQKDAWGDHKWEC 467
           KC+ CQ   YC ++ Q   W  HK EC
Sbjct: 156 KCAKCQVARYCSQAHQVIDWPAHKLEC 182


>U40426-2|AAP40526.1|  536|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform a protein.
          Length = 536

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +3

Query: 345 GNRCDNCLEKVKLLKC-SGCQFVYYCGRS---CQKDAWGDHKWECPNL 476
           G  CDNCL KV  + C         C  +   C+K+ + DH W C N+
Sbjct: 71  GYECDNCLLKVDNINCLRAVSTKIQCKVNPIHCRKETF-DHHWICGNI 117


>AC024757-4|AAK68429.2|  371|Caenorhabditis elegans Methionine
           aminopeptidase protein 1 protein.
          Length = 371

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = +3

Query: 342 QGNRCDNCLEKVKLLKCSGC-----QFVYYCGRSCQKDAWGDHKW 461
           +G +C  C +  KL +C  C        Y+C +SC K  W  HK+
Sbjct: 5   EGKKCIGCQKPAKL-RCPTCIKMSLPDAYFCDQSCFKAFWPIHKF 48


>Z71180-6|CAI79160.1|  702|Caenorhabditis elegans Hypothetical
           protein F22E12.4d protein.
          Length = 702

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 354 CDNCLEKVKLLKCSGCQFVYYCGRSCQKDAWGDHKWECPNLK 479
           C +     +L  C  C  V YC +  Q+  W  HK  C +L+
Sbjct: 42  CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQ 83


>Z71180-5|CAD44114.1|  363|Caenorhabditis elegans Hypothetical
           protein F22E12.4b protein.
          Length = 363

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 354 CDNCLEKVKLLKCSGCQFVYYCGRSCQKDAWGDHKWECPNLK 479
           C +     +L  C  C  V YC +  Q+  W  HK  C +L+
Sbjct: 42  CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQ 83


>Z71180-4|CAA94893.2|  723|Caenorhabditis elegans Hypothetical
           protein F22E12.4a protein.
          Length = 723

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 354 CDNCLEKVKLLKCSGCQFVYYCGRSCQKDAWGDHKWECPNLK 479
           C +     +L  C  C  V YC +  Q+  W  HK  C +L+
Sbjct: 42  CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQ 83


>AL021475-7|CAI79248.1|  702|Caenorhabditis elegans Hypothetical
           protein F22E12.4d protein.
          Length = 702

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 354 CDNCLEKVKLLKCSGCQFVYYCGRSCQKDAWGDHKWECPNLK 479
           C +     +L  C  C  V YC +  Q+  W  HK  C +L+
Sbjct: 42  CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQ 83


>AL021475-6|CAD44157.1|  363|Caenorhabditis elegans Hypothetical
           protein F22E12.4b protein.
          Length = 363

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 354 CDNCLEKVKLLKCSGCQFVYYCGRSCQKDAWGDHKWECPNLK 479
           C +     +L  C  C  V YC +  Q+  W  HK  C +L+
Sbjct: 42  CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQ 83


>AL021475-5|CAA16314.2|  723|Caenorhabditis elegans Hypothetical
           protein F22E12.4a protein.
          Length = 723

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 354 CDNCLEKVKLLKCSGCQFVYYCGRSCQKDAWGDHKWECPNLK 479
           C +     +L  C  C  V YC +  Q+  W  HK  C +L+
Sbjct: 42  CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQ 83


>AF178536-1|AAD56365.1|  723|Caenorhabditis elegans EGL-9 protein.
          Length = 723

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 354 CDNCLEKVKLLKCSGCQFVYYCGRSCQKDAWGDHKWECPNLK 479
           C +     +L  C  C  V YC +  Q+  W  HK  C +L+
Sbjct: 42  CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQ 83


>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
           protein K08C7.3b protein.
          Length = 3672

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 339 EQGNRCDNCLEKVKLLKCSGCQFVYY 416
           E G  C NC E  + + C+ C F Y+
Sbjct: 386 EGGGVCKNCRENTEGVNCNKCSFGYF 411


>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
           protein K08C7.3a protein.
          Length = 3704

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 339 EQGNRCDNCLEKVKLLKCSGCQFVYY 416
           E G  C NC E  + + C+ C F Y+
Sbjct: 386 EGGGVCKNCRENTEGVNCNKCSFGYF 411


>Z22177-12|CAA80152.1|  974|Caenorhabditis elegans Hypothetical
           protein F54G8.4 protein.
          Length = 974

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
 Frame = +3

Query: 246 NEEKFRNTTSEIKPGDLLLSEQPFAYVLSSKEQGNRCDNCLEKVKLLKCSGCQ--FVYYC 419
           NE + R    E+           F   L   EQ   C  CL++ K  K   CQ  F Y C
Sbjct: 7   NEAEAREKMRELMSRPPSSRPADFVNPLEKIEQLLTCPICLDRYKQPKLLPCQHTFCYPC 66

Query: 420 GRSCQKDAWGDHKWECPNLKRVAPKVIPDGHECWQRSSTG*TGAIDTRL 566
             SC      + K  CP   R    +  DG + +Q + T  TG ++  L
Sbjct: 67  LESCADTLHRNLK--CPEC-RAEHNIPYDGVKAFQPNYT-LTGFLEIHL 111


>Z19155-5|CAA79562.1|  974|Caenorhabditis elegans Hypothetical
           protein F54G8.4 protein.
          Length = 974

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
 Frame = +3

Query: 246 NEEKFRNTTSEIKPGDLLLSEQPFAYVLSSKEQGNRCDNCLEKVKLLKCSGCQ--FVYYC 419
           NE + R    E+           F   L   EQ   C  CL++ K  K   CQ  F Y C
Sbjct: 7   NEAEAREKMRELMSRPPSSRPADFVNPLEKIEQLLTCPICLDRYKQPKLLPCQHTFCYPC 66

Query: 420 GRSCQKDAWGDHKWECPNLKRVAPKVIPDGHECWQRSSTG*TGAIDTRL 566
             SC      + K  CP   R    +  DG + +Q + T  TG ++  L
Sbjct: 67  LESCADTLHRNLK--CPEC-RAEHNIPYDGVKAFQPNYT-LTGFLEIHL 111


>U41625-3|AAA83326.1|  264|Caenorhabditis elegans Hypothetical
           protein K03A1.4a protein.
          Length = 264

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 247 FPQPRH*L-YISRLNCKNVLEECKLISNF 164
           FP P+H    I+  NCKN +EE K   NF
Sbjct: 108 FPYPKHAATQITASNCKNKIEEYKRAFNF 136


>AL110490-8|CAB54444.2|  602|Caenorhabditis elegans Hypothetical
           protein Y48B6A.7 protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 94  RTPGSERTAYKISYFNSTRSRLFKNWKLIYIPL 192
           R   +E TAY    ++S+    +  W L+YIPL
Sbjct: 564 RVKDTEYTAYLTQEYSSSSLTTYSYWLLLYIPL 596


>AF025379-1|AAC14017.1|  602|Caenorhabditis elegans
           acetylcholinesterase protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 94  RTPGSERTAYKISYFNSTRSRLFKNWKLIYIPL 192
           R   +E TAY    ++S+    +  W L+YIPL
Sbjct: 564 RVKDTEYTAYLTQEYSSSSLTTYSYWLLLYIPL 596


>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
           chain protein.
          Length = 3704

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 339 EQGNRCDNCLEKVKLLKCSGCQFVYY 416
           E G  C NC E  + + C+ C F Y+
Sbjct: 386 EGGGVCKNCRENTEGVNCNKCSFGYF 411


>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
           protein.
          Length = 3704

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 339 EQGNRCDNCLEKVKLLKCSGCQFVYY 416
           E G  C NC E  + + C+ C F Y+
Sbjct: 386 EGGGVCKNCRENTEGVNCNKCSFGYF 411


>AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical
            protein F25G6.2 protein.
          Length = 1143

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 28/82 (34%), Positives = 39/82 (47%)
 Frame = -3

Query: 465  TPTCDLPMHLSDKIFHSNKQIDILNILGV*LFLSNYHIGFLVLWTIIHKRMVALTTKDLQ 286
            TP+ DL   L  KI H  +++DI  +L +   L    +  L+  T I +   A   K + 
Sbjct: 870  TPSTDLIQKL--KILHDERKMDIRALLPIIGGLEREEVVRLIP-TFIFR---AEYQKSVN 923

Query: 285  VLFRKLYF*ISPHFLNHVINYI 220
            VLFRKLY    P   N V + I
Sbjct: 924  VLFRKLYTVRDPQTGNLVFDPI 945


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,657,761
Number of Sequences: 27780
Number of extensions: 360828
Number of successful extensions: 1009
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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