Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00196
         (684 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68105-1|CAA92122.2|  195|Caenorhabditis elegans Hypothetical pr...    67   1e-11
U40946-4|AAA81726.1|  414|Caenorhabditis elegans Hypothetical pr...    32   0.33 
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AL021171-5|CAE17871.1|  688|Caenorhabditis elegans Hypothetical ...    28   5.4  
AL110487-2|CAB54425.1|  445|Caenorhabditis elegans Hypothetical ...    28   7.1  
Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z81458-4|CAB03824.1|  623|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical...    27   9.4  
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z68105-1|CAA92122.2|  195|Caenorhabditis elegans Hypothetical
           protein F13E6.1 protein.
          Length = 195

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 28/67 (41%), Positives = 49/67 (73%)
 Frame = +3

Query: 276 ELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQKTES 455
           EL + E+EI+TL+ VL ++ + +++LKRKLG+T + E+++D+N+ LK V ++  YQKT  
Sbjct: 67  ELDKTEEEISTLKQVLSARQKHAAELKRKLGLTPFSELSQDINRSLKTVTDTDAYQKTAE 126

Query: 456 VIKTTAE 476
           V   T++
Sbjct: 127 VAAATSD 133



 Score = 31.9 bits (69), Expect = 0.44
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 512 VSSKLGQMRNSESFRSIEERVGSAYENVK 598
           V  K   MRNS  F+S E ++GSA  N K
Sbjct: 135 VKEKWNDMRNSSLFKSFESKLGSALNNAK 163


>U40946-4|AAA81726.1|  414|Caenorhabditis elegans Hypothetical
           protein W05H9.1 protein.
          Length = 414

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
 Frame = +3

Query: 279 LARVEDEIATLRTVLQSKIRQSSDLKRK---LGITVWKEITEDVNQGLKNV------KES 431
           L++V D +      L+ + ++ ++ K+K     I  WKE+++ V + +++V      KE 
Sbjct: 69  LSKVSDAVKQRADELEKEKQEKAEAKKKEAEAAIEKWKEVSQQVGEFVESVKEKKQAKEQ 128

Query: 432 QVYQKTESVIKTTAEK 479
           +  QK +  +KT  +K
Sbjct: 129 EKQQKIDDFVKTFTDK 144


>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical
           protein B0416.1 protein.
          Length = 1203

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +3

Query: 228 RPHTRAGRPLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVW 380
           RPHTR G P   +   E    +D+ A+   +L+ KI+Q  ++ +KL    W
Sbjct: 63  RPHTRLGNPNFDDDDDEFDEEDDKEASKDRILK-KIQQKKEIIQKLRGQPW 112


>Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical
           protein Y53C12B.1 protein.
          Length = 793

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
 Frame = +3

Query: 369 ITVWKEITEDVNQGLKNVKESQVYQ-KTESVIKTTAEKTSSIIGGITAACP--ASSVRCA 539
           I VWK++TE+  +   N +   + Q +T + + +    + +++  +T A P  A  V  A
Sbjct: 631 IVVWKDVTEEKQKAEDNKRREAIEQDQTLTNLLSQKRYSEALVFALTLAKPFCAFKVINA 690

Query: 540 TRSLSAPSK-NASVRLMKTSRVK*LLDRT 623
             +   P +  +++R + T +++ LL  T
Sbjct: 691 LMAEETPEELGSAIRRLDTRQIEILLQFT 719


>AL021171-5|CAE17871.1|  688|Caenorhabditis elegans Hypothetical
           protein H04D03.4 protein.
          Length = 688

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -3

Query: 148 YFTMKNSYGVK*MKNIKLI--FL*KSNRTQNFYVCSTLISQALLVKIVTNI 2
           Y  +   Y +K  K++K I  FL  SNR+ +   C  L+SQ  ++  V N+
Sbjct: 323 YLDLHRGYHMK--KSLKRIETFLSVSNRSYDLIKCLKLVSQVTMISKVNNV 371


>AL110487-2|CAB54425.1|  445|Caenorhabditis elegans Hypothetical
           protein Y39E4B.2 protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 336 RQSSDLKRKLGITVWKEITEDVNQGLKNVKES 431
           ++ S LK KLGIT W ++ + + +  K +K S
Sbjct: 204 KEYSRLKMKLGITSWMKLKDPIEELKKIIKTS 235


>Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK849.2c protein.
          Length = 390

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
 Frame = +3

Query: 249 RPLRAEWSRELARVEDEIATLRTVLQSKIR-QSSDLKRKLGITVWKEITEDVNQGLKNVK 425
           R  R    +E+ ++  ++ +L+  L SK     SD+ +K   T   +   ++ QGL  V 
Sbjct: 92  RAARQSMEKEVEQLMIQVHSLQCQLHSKTAPHESDMIKKKLETQLTQFRSELTQGLSTVC 151

Query: 426 ESQVYQKTESVIKTTAEKTSSIIGGITAA 512
           E ++ +K     K T +   + + G   A
Sbjct: 152 ELEIARKECDRSKRTIQALETEVFGARLA 180


>Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical
           protein ZK849.2b protein.
          Length = 412

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
 Frame = +3

Query: 249 RPLRAEWSRELARVEDEIATLRTVLQSKIR-QSSDLKRKLGITVWKEITEDVNQGLKNVK 425
           R  R    +E+ ++  ++ +L+  L SK     SD+ +K   T   +   ++ QGL  V 
Sbjct: 114 RAARQSMEKEVEQLMIQVHSLQCQLHSKTAPHESDMIKKKLETQLTQFRSELTQGLSTVC 173

Query: 426 ESQVYQKTESVIKTTAEKTSSIIGGITAA 512
           E ++ +K     K T +   + + G   A
Sbjct: 174 ELEIARKECDRSKRTIQALETEVFGARLA 202


>Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical
           protein ZK849.2a protein.
          Length = 414

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
 Frame = +3

Query: 249 RPLRAEWSRELARVEDEIATLRTVLQSKIR-QSSDLKRKLGITVWKEITEDVNQGLKNVK 425
           R  R    +E+ ++  ++ +L+  L SK     SD+ +K   T   +   ++ QGL  V 
Sbjct: 116 RAARQSMEKEVEQLMIQVHSLQCQLHSKTAPHESDMIKKKLETQLTQFRSELTQGLSTVC 175

Query: 426 ESQVYQKTESVIKTTAEKTSSIIGGITAA 512
           E ++ +K     K T +   + + G   A
Sbjct: 176 ELEIARKECDRSKRTIQALETEVFGARLA 204


>Z81458-4|CAB03824.1|  623|Caenorhabditis elegans Hypothetical
           protein C03E10.5 protein.
          Length = 623

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
 Frame = +3

Query: 462 KTTAEKTSSIIGGITAACPASSVRCATRSLSAPSKNASVR---LMKTSRVK*LLDRTRLR 632
           K++ EK+  ++ G    CPA++    + +  A S  ASV    L  T+        T  +
Sbjct: 129 KSSGEKSKMVVCGKLGKCPATTPSTISTTSGASSSTASVSSTILSSTATTMVTSTPTTEK 188

Query: 633 ASTRRCVTPVA 665
           +ST    TP +
Sbjct: 189 SSTTTTSTPTS 199


>AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical
           protein Y57A10A.19 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 22/79 (27%), Positives = 30/79 (37%)
 Frame = +2

Query: 416 KRQRKPSIPKN*ICDKNDRREDVFDHRRHHGGVSSKLGQMRNSESFRSIEERVGSAYENV 595
           K QRKP   +    ++ D+RED  D RR          + R S   R++  R        
Sbjct: 262 KDQRKPREDRRRSVERQDQREDRRDRRRS----PEDPRERRRSPEDRTVRRRSPERRRQQ 317

Query: 596 KGKVASRSNSTQSFDEALR 652
           +     R  S Q  DE  R
Sbjct: 318 RSPSVERRKSPQRRDERRR 336


>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
           protein Y18D10A.1 protein.
          Length = 1634

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
 Frame = +3

Query: 450 ESVIKTTAEKTSSIIG--GITAACPASSVRCATRSLSAPSKNASVRLMKTSRVK*LLDRT 623
           E++ + TAE+  +++G  G   A    S            +     +MK   VK    R 
Sbjct: 368 ETIAQATAERKKALLGAQGAAGASEPGSSSSIHGKKGKTVRELQTEMMKGESVKEKAARM 427

Query: 624 RLRASTRRCVTPVAPPRP 677
           R  AS  R   P   P P
Sbjct: 428 RAEASAGRSQAPGPAPAP 445


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,621,584
Number of Sequences: 27780
Number of extensions: 288239
Number of successful extensions: 978
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)