Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00195
(584 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein. 23 1.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 1.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 1.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 1.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 1.4
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 21 5.8
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 5.8
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 5.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 5.8
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 5.8
>AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein.
Length = 247
Score = 23.4 bits (48), Expect = 1.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 180 SGCRRLIAGRTINRTWRLTKTSTFNFAW 97
S RR++A IN+T++ T T T W
Sbjct: 128 SQSRRILASAGINKTFKSTLTGTPVDGW 155
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.4
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 517 HLLGKKKLRNRTKWHDII-QNTLFSHR 440
HL K K+R+R +W ++ L HR
Sbjct: 685 HLKDKMKIRHRKRWSQVMYMYYLLGHR 711
Score = 21.8 bits (44), Expect = 4.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 539 FRGKTVKSFIRQKKTSKSNKMARYYSEH 456
FRGK + KK + S+ AR+Y ++
Sbjct: 808 FRGKALMDDNVMKKYTTSSSEARHYVQY 835
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.4
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 517 HLLGKKKLRNRTKWHDII-QNTLFSHR 440
HL K K+R+R +W ++ L HR
Sbjct: 685 HLKDKMKIRHRKRWSQVMYMYYLLGHR 711
Score = 21.8 bits (44), Expect = 4.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 539 FRGKTVKSFIRQKKTSKSNKMARYYSEH 456
FRGK + KK + S+ AR+Y ++
Sbjct: 808 FRGKALMDDNVMKKYTTSSSEARHYVQY 835
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.4
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 517 HLLGKKKLRNRTKWHDII-QNTLFSHR 440
HL K K+R+R +W ++ L HR
Sbjct: 685 HLKDKMKIRHRKRWSQVMYMYYLLGHR 711
Score = 21.8 bits (44), Expect = 4.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 539 FRGKTVKSFIRQKKTSKSNKMARYYSEH 456
FRGK + KK + S+ AR+Y ++
Sbjct: 808 FRGKALMDDNVMKKYTTSSSEARHYVQY 835
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.4
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 517 HLLGKKKLRNRTKWHDII-QNTLFSHR 440
HL K K+R+R +W ++ L HR
Sbjct: 685 HLKDKMKIRHRKRWSQVMYMYYLLGHR 711
Score = 21.8 bits (44), Expect = 4.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 539 FRGKTVKSFIRQKKTSKSNKMARYYSEH 456
FRGK + KK + S+ AR+Y ++
Sbjct: 808 FRGKALMDDNVMKKYTTSSSEARHYVQY 835
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 517 HLLGKKKLRNRTKW 476
HL KKK+R + +W
Sbjct: 110 HLKDKKKIRAKKRW 123
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 517 HLLGKKKLRNRTKW 476
HL KKK+R + +W
Sbjct: 424 HLKDKKKIRAKKRW 437
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 517 HLLGKKKLRNRTKW 476
HL KKK+R + +W
Sbjct: 657 HLKDKKKIRAKKRW 670
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 517 HLLGKKKLRNRTKW 476
HL KKK+R + +W
Sbjct: 657 HLKDKKKIRAKKRW 670
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 484 FDFEVFFCLINDLTVFP 534
F+ E+F C ++ LTV P
Sbjct: 274 FNIEMFLCNMSLLTVIP 290
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,013
Number of Sequences: 336
Number of extensions: 2380
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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