Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00195
         (584 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.2  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.5  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   5.5  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   5.5  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   5.5  
Y17701-1|CAA76821.1|   81|Anopheles gambiae apyrase protein.           23   9.6  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.6  
AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase p...    23   9.6  
AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.         23   9.6  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 536  RGKTVKSFIRQKKTSKSNKMARYYSEHAF 450
            RG +  SF+R      SN  A +YS   +
Sbjct: 1309 RGASSPSFLRYDSDCSSNSSANFYSSDEY 1337


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 95  SQAKLKVDVLVSRQVRLIVRPAIRRRHPDAKTHRPHNE 208
           +++K+K + LV +  R+ + P        AK HR   E
Sbjct: 814 NKSKIKQESLVQQSSRMFLEPPKHHASRGAKPHRSRCE 851


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 401 LCVLSLRHSDSQSTM*EKRVLNNIV 475
           LC+L +   DS     EKR+LNN++
Sbjct: 8   LCLLVIYIKDSLQGPHEKRLLNNLL 32


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 401 LCVLSLRHSDSQSTM*EKRVLNNIV 475
           LC+L +   DS     EKR+LNN++
Sbjct: 8   LCLLVIYIKDSLQGPHEKRLLNNLL 32


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 224 SLNYFIRDSLVGQEPSRSDSGAGL 295
           SL+Y +R  L+G   S S  G GL
Sbjct: 5   SLDYEVRHLLLGNGSSSSGGGVGL 28


>Y17701-1|CAA76821.1|   81|Anopheles gambiae apyrase protein.
          Length = 81

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 75  ARTSEKGLKCRRERAAVCQAG 13
           A TSE+  KC+      C AG
Sbjct: 52  AETSERSSKCKAAEGDTCIAG 72


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 130 SPSSINRAARDQAPAPGCENASPS 201
           S +++NR AR    AP  E+ SPS
Sbjct: 386 STTTLNRIARFTNRAPSKEDLSPS 409


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 130 SPSSINRAARDQAPAPGCENASPS 201
           S +++NR AR    AP  E+ SPS
Sbjct: 386 STTTLNRIARFTNRAPSKEDLSPS 409


>AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase
           protein.
          Length = 557

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 75  ARTSEKGLKCRRERAAVCQAG 13
           A TSE+  KC+      C AG
Sbjct: 52  AETSERSSKCKAAEGDTCIAG 72


>AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.
          Length = 557

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 75  ARTSEKGLKCRRERAAVCQAG 13
           A TSE+  KC+      C AG
Sbjct: 52  AETSERSSKCKAAEGDTCIAG 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,239
Number of Sequences: 2352
Number of extensions: 10575
Number of successful extensions: 30
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)