Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00194
         (762 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6LFD2 Cluster: Putative syntaxin binding protein; n=1;...    36   0.83 
UniRef50_A7HNQ7 Cluster: Response regulator receiver modulated m...    34   3.3  
UniRef50_Q8D271 Cluster: YtfM protein; n=1; Wigglesworthia gloss...    33   5.8  
UniRef50_Q54GT5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  

>UniRef50_Q6LFD2 Cluster: Putative syntaxin binding protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative syntaxin binding
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 703

 Score = 36.3 bits (80), Expect = 0.83
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 719 LKLTNFSYNEFCKPLTNINNVVMYKFSNKIFIEMQNHLLYSNVINNTF 576
           L + ++SY   C  L NIN +   +F      E  N  +YSN  N+T+
Sbjct: 269 LFIHDYSYQSLCYDLLNINTIYEMQFDQTKINEQPNEHIYSNTCNDTY 316


>UniRef50_A7HNQ7 Cluster: Response regulator receiver modulated
           metal dependent phosphohydrolase; n=1; Fervidobacterium
           nodosum Rt17-B1|Rep: Response regulator receiver
           modulated metal dependent phosphohydrolase -
           Fervidobacterium nodosum Rt17-B1
          Length = 471

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 692 EFCKPLTNINNVVMYKFSNKIFIEMQNHLLYSNVINNTFKII 567
           EF KP   I   ++  F  K  + M+NHLL  ++I+  +KI+
Sbjct: 244 EFSKPFDEIYKNLIEMFFEKFVLVMENHLLTQDLIDTLYKIV 285


>UniRef50_Q8D271 Cluster: YtfM protein; n=1; Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis|Rep:
           YtfM protein - Wigglesworthia glossinidia brevipalpis
          Length = 579

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = -2

Query: 761 SNLNVQRNSLIL*PLKLTNFSYNEFCKPLTNINNVVMYKFSNKIFIEMQNHLLYSNVINN 582
           +N  +++  LI    ++   +Y+E   P   +N    +  SNKIF    N  +    +NN
Sbjct: 378 NNFKIKKKILIYPSFQINKINYDEISFPFFGLNQNYEFNLSNKIFGSSVNFFMLK--VNN 435

Query: 581 TF 576
           TF
Sbjct: 436 TF 437


>UniRef50_Q54GT5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 452

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -1

Query: 330 NKAETVESSRNNIKPSGPTPYL*QKPANFILTQQLRVSPQDMQANSHTRWTRDKCI 163
           N+   + ++ NN KP  P     Q+ + +I  QQ R+ PQ  Q    ++W  DK +
Sbjct: 248 NQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQ-RLPPQQYQNEQKSKWWLDKLV 302


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,081,581
Number of Sequences: 1657284
Number of extensions: 12282017
Number of successful extensions: 28085
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28074
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)