Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00194
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.6  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   6.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   8.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.1  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +3

Query: 132 RSPESECARSKCTYHVSTVCDCLPACPAD 218
           RS ++EC    C   V     C   CP D
Sbjct: 83  RSIKNECPEPTCDEPVHRPGRCCKTCPGD 111


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 594 IRVQQVILHFYENFVTKFVHDHIIDICQRL 683
           IR++  +++F   F    +  HI  +C+ L
Sbjct: 142 IRLKNCVIYFNRIFGWNILFGHIFTVCRTL 171


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 698 YNEFCKPLTNINNVVMYKFSNKIFIEM 618
           Y E    + NI N+ M +     ++EM
Sbjct: 23  YEEVAAVIDNIENITMQQLQEMKYLEM 49


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 673 VKGLQNSLYEKLVSFNGHNIKLFR 744
           VK +    Y+ + + NGH IK  R
Sbjct: 127 VKPIIAFYYKPIKTLNGHEIKFIR 150


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 202 LHVLRTDAELLCENEIRRFLLEIRCRPRRLDVVA 303
           L    T+ +LL E E      +  CRPRR+++ A
Sbjct: 7   LRTAYTNTQLL-ELEKEFHFNKYLCRPRRIEIAA 39


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 522 LLTIQLLKEPNLNYSISKKLSWNVPI 445
           L+T+ + +   L Y  +KKL + +P+
Sbjct: 294 LITVTVCELTILEYKRTKKLLYRIPV 319


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 522 LLTIQLLKEPNLNYSISKKLSWNVPI 445
           L+T+ + +   L Y  +KKL + +P+
Sbjct: 119 LITVTVCELTILEYKRTKKLLYRIPV 144


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 202 LHVLRTDAELLCENEIRRFLLEIRCRPRRLDVVA 303
           L    T+ +LL E E      +  CRPRR+++ A
Sbjct: 138 LRTAYTNTQLL-ELEKEFHFNKYLCRPRRIEIAA 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,561
Number of Sequences: 336
Number of extensions: 3335
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)