Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00193
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B45BA Cluster: PREDICTED: similar to ENSANGP000...    46   7e-04
UniRef50_Q9W3D8 Cluster: CG12111-PA; n=3; Sophophora|Rep: CG1211...    36   0.76 
UniRef50_Q4Q3V5 Cluster: Cell division cycle 45 (CDC45), putativ...    35   2.3  
UniRef50_Q80QU8 Cluster: Putative uncharacterized protein; n=1; ...    34   3.0  
UniRef50_Q4P107 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  
UniRef50_Q2QY67 Cluster: Retrotransposon protein, putative, Ty3-...    33   5.3  
UniRef50_Q2ST06 Cluster: Membrane protein, putative; n=2; Mycopl...    33   7.0  
UniRef50_A4R172 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_Q9H6Y7 Cluster: E3 ubiquitin-protein ligase RNF167 prec...    33   7.0  
UniRef50_Q08M77 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  
UniRef50_A4VQ24 Cluster: Type II restriction enzyme, methylase s...    33   9.3  
UniRef50_Q00VW8 Cluster: Chromosome 14 contig 1, DNA sequence; n...    33   9.3  
UniRef50_Q9Y4L6 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  

>UniRef50_UPI00015B45BA Cluster: PREDICTED: similar to
           ENSANGP00000027469, partial; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to
           ENSANGP00000027469, partial - Nasonia vitripennis
          Length = 758

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = +1

Query: 244 SSDLHWEPQHCGEIKDFICEQTRCYYYNYGSIPVSSA 354
           S +L W    C  +K+FICEQ+R Y+YNYGSI V ++
Sbjct: 642 SPNLMWSTVDCMLLKNFICEQSRSYHYNYGSISVPAS 678


>UniRef50_Q9W3D8 Cluster: CG12111-PA; n=3; Sophophora|Rep:
           CG12111-PA - Drosophila melanogaster (Fruit fly)
          Length = 188

 Score = 36.3 bits (80), Expect = 0.76
 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +2

Query: 2   FWTSGNNLGTD-MFLWMSTGLPFN-ATFNYMRRLP 100
           FW SGN+LGT+  F WMS G P   A +N  +++P
Sbjct: 107 FWISGNDLGTEGAFYWMSNGRPMTYAPWNGPKQMP 141


>UniRef50_Q4Q3V5 Cluster: Cell division cycle 45 (CDC45), putative;
           n=3; Leishmania|Rep: Cell division cycle 45 (CDC45),
           putative - Leishmania major
          Length = 785

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
 Frame = -2

Query: 246 ALSAMQPLVMTCSVLEYR----PCRAVRCGAVLPCGTSRGSMLSSACWAGASMG 97
           AL+A++PL+++C + + R    P  +   G+ LPCG    +++ +  W+ AS G
Sbjct: 605 ALTALRPLILSCVLPQARLAAPPTASSGSGSGLPCGPGTDALVPAVHWSRASGG 658


>UniRef50_Q80QU8 Cluster: Putative uncharacterized protein; n=1;
           Oyster mushroom spherical virus|Rep: Putative
           uncharacterized protein - Oyster mushroom spherical
           virus
          Length = 131

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = -2

Query: 261 PVEVGALSAMQPLVMTCSVLEYR-PCRAVRCGAVLPCGTSRGSMLSSACWAGASMGSLRM 85
           P+     S M  L MT  V+E R P R+V CG +     S  SML+S C +   + SL +
Sbjct: 12  PLSAPKASQMITLRMTSRVVERRWPSRSVSCGCLTYRSGSLSSMLNSRCASLPLLASLAL 71

Query: 84  *LKVALNGRPV 52
             + A +G P+
Sbjct: 72  CARPA-SGAPI 81


>UniRef50_Q4P107 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 452

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 22/80 (27%), Positives = 36/80 (45%)
 Frame = +2

Query: 26  GTDMFLWMSTGLPFNATFNYMRRLPIDAPAQHADDSMDPLDVPQGSTAPQRTARHGRYSR 205
           G+  + W+S G  F +TF+ +      A    A+D+  P  +P+   APQ +     +S 
Sbjct: 311 GSTKYSWLSGGSSFPSTFSPLGAKKAKAEQGAAEDATTPGRLPKPKFAPQPSV--SNWSS 368

Query: 206 TEHVMTNGCIALKAPTSTGS 265
                TN   +   P STG+
Sbjct: 369 AGAADTNSAGSTANPVSTGA 388


>UniRef50_Q2QY67 Cluster: Retrotransposon protein, putative,
           Ty3-gypsy subclass; n=3; Oryza sativa|Rep:
           Retrotransposon protein, putative, Ty3-gypsy subclass -
           Oryza sativa subsp. japonica (Rice)
          Length = 832

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +2

Query: 128 DSMDPLDVPQGSTAPQRTARHGRYSRT--EHVMTNGCIALKAPTSTGS 265
           D  D +  P+G   P+ T   G  SRT  EH+ +  C  LK PTS  S
Sbjct: 588 DFYDIIPYPRGYKIPEFTKFSGEESRTTWEHIRSRTCKDLKCPTSRNS 635


>UniRef50_Q2ST06 Cluster: Membrane protein, putative; n=2;
            Mycoplasma|Rep: Membrane protein, putative - Mycoplasma
            capricolum subsp. capricolum (strain California kid /
            ATCC27343 / NCTC 10154)
          Length = 1965

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 590  TLIPAINDQDQKEEPTQGPYEDDEGIVGDDPAA 688
            TL P +N  DQ+ +  +  Y+DDEG++   PA+
Sbjct: 955  TLNPTVNSSDQQNQVVKYMYKDDEGVLRFQPAS 987


>UniRef50_A4R172 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 495

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +2

Query: 512 SSLHTSRLAPCSNPHRKSTPTIRELRTLIPAINDQDQKEEPTQGPYEDDEGIV 670
           S+L TS + P + P  ++TP+   +  + P ++  ++K  PT  P  D  G V
Sbjct: 290 STLVTSLIQPSAVPAPEATPSTSRVEFIPPVVSITNKKPSPTPTPSADPNGTV 342


>UniRef50_Q9H6Y7 Cluster: E3 ubiquitin-protein ligase RNF167
           precursor; n=28; Euteleostomi|Rep: E3 ubiquitin-protein
           ligase RNF167 precursor - Homo sapiens (Human)
          Length = 350

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 24/70 (34%), Positives = 34/70 (48%)
 Frame = +2

Query: 509 ASSLHTSRLAPCSNPHRKSTPTIRELRTLIPAINDQDQKEEPTQGPYEDDEGIVGDDPAA 688
           A + H+  + P     RK+ P  ++     P   D+DQ+EE TQG  E DEG   D PA+
Sbjct: 249 AHAYHSRCVDPWLTQTRKTCPICKQPVHRGPG--DEDQEEE-TQGQEEGDEGEPRDHPAS 305

Query: 689 YLTNEANDAP 718
             T     +P
Sbjct: 306 ERTPLLGSSP 315


>UniRef50_Q08M77 Cluster: Putative uncharacterized protein; n=1;
           Stigmatella aurantiaca DW4/3-1|Rep: Putative
           uncharacterized protein - Stigmatella aurantiaca DW4/3-1
          Length = 262

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 201 EYRPCRAVRCGAVLPCGTSRGSMLSSACWAGASMGSLRM*LKVAL 67
           EY P  A R  + +PCGT    +  +  W+G ++GS +   +V L
Sbjct: 190 EYDPATAQRLASFVPCGTPTLGVQRNCGWSGDAIGSCQPGTRVVL 234


>UniRef50_A4VQ24 Cluster: Type II restriction enzyme, methylase
            subunit; n=1; Pseudomonas stutzeri A1501|Rep: Type II
            restriction enzyme, methylase subunit - Pseudomonas
            stutzeri (strain A1501)
          Length = 1635

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +1

Query: 415  VVLATATALRAPADPLQP*QSHRQAATFFP*RLQSAHLKTSALFKSPPQIDSHYSRAADA 594
            V+L  A+   APAD L P    +Q   F P R +  H+  +AL ++ PQ+      A   
Sbjct: 890  VLLGNASLSSAPADDLFPETQPQQGLDFTPERDRYGHVDIAALVEALPQLQVAQLVAGQQ 949

Query: 595  H 597
            H
Sbjct: 950  H 950


>UniRef50_Q00VW8 Cluster: Chromosome 14 contig 1, DNA sequence; n=1;
           Ostreococcus tauri|Rep: Chromosome 14 contig 1, DNA
           sequence - Ostreococcus tauri
          Length = 130

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2

Query: 494 PSSLDASSLHTSRLAPCSNPHRKSTPTIRELRTLIP 601
           PSS+D S +   R + CS+PH +  P  R LRT  P
Sbjct: 79  PSSIDGS-MTVVRRSTCSHPHARPCPRARALRTTDP 113


>UniRef50_Q9Y4L6 Cluster: Putative uncharacterized protein; n=1;
           Homo sapiens|Rep: Putative uncharacterized protein -
           Homo sapiens (Human)
          Length = 158

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 23/70 (32%), Positives = 35/70 (50%)
 Frame = +2

Query: 509 ASSLHTSRLAPCSNPHRKSTPTIRELRTLIPAINDQDQKEEPTQGPYEDDEGIVGDDPAA 688
           +++ H+  + P     RK+ P  ++     P   D+DQ+EE TQG  E DEG   D PA+
Sbjct: 57  SAAYHSRCVDPWLTQTRKTCPICKQPVHRGPG--DEDQEEE-TQGQEEGDEGEPRDHPAS 113

Query: 689 YLTNEANDAP 718
             T     +P
Sbjct: 114 ERTPLLGSSP 123


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,836,762
Number of Sequences: 1657284
Number of extensions: 14780955
Number of successful extensions: 44985
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 42854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44954
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)