Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00193
(718 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 29 0.11
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 26 1.0
AY146748-1|AAO12063.1| 279|Anopheles gambiae odorant-binding pr... 25 1.8
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 25 1.8
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 25 3.1
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 25 3.1
AY146755-1|AAO12070.1| 320|Anopheles gambiae odorant-binding pr... 24 4.1
AY146754-1|AAO12069.1| 334|Anopheles gambiae odorant-binding pr... 24 4.1
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.4
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.4
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.4
AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.4
AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding pr... 24 5.4
AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding pr... 24 5.4
AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding pr... 24 5.4
AY146752-1|AAO12067.1| 277|Anopheles gambiae odorant-binding pr... 23 7.2
AY146751-1|AAO12066.1| 277|Anopheles gambiae odorant-binding pr... 23 7.2
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 23 9.5
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 23 9.5
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 23 9.5
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 9.5
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 29.5 bits (63), Expect = 0.11
Identities = 12/53 (22%), Positives = 23/53 (43%)
Frame = +1
Query: 145 RRTTRKHCSTTHRPTWSVFQDGTRHD*WLHRAQSSDLHWEPQHCGEIKDFICE 303
R+ R+ + W D +RH W HR + W+ + G++ +C+
Sbjct: 866 RKQERQATIEQWQQQWDAEADTSRHTRWAHRVLPNIGSWQSRKHGDVSFHLCQ 918
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 26.2 bits (55), Expect = 1.0
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 145 RRTTRKHCSTTHRPTW---SVFQDGTRHD*WLHRAQSSDLHWEPQHCGEI 285
R T R++ + W ++ QD +RH W HR S W+ + G++
Sbjct: 926 RATERQNTIDCWQEEWDADALQQDASRHTRWTHRVIPSVGDWQSRKHGDM 975
>AY146748-1|AAO12063.1| 279|Anopheles gambiae odorant-binding
protein AgamOBP41 protein.
Length = 279
Score = 25.4 bits (53), Expect = 1.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 301 EQTRCYYYNYGSI 339
E CYYYNYG++
Sbjct: 134 ESFLCYYYNYGNL 146
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 25.4 bits (53), Expect = 1.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 608 NDQDQKEEPTQGPYEDDEGIVGDDP 682
N + + +P + E DEG+ DDP
Sbjct: 1351 NQNEDEVQPMEVEEERDEGVAADDP 1375
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 24.6 bits (51), Expect = 3.1
Identities = 12/47 (25%), Positives = 19/47 (40%)
Frame = +1
Query: 145 RRTTRKHCSTTHRPTWSVFQDGTRHD*WLHRAQSSDLHWEPQHCGEI 285
R R+ T + W D +R+ W HR W+ + GE+
Sbjct: 933 RLEERQRTITMWQSQWDAEADTSRYTRWTHRIIRDISAWQGRRHGEM 979
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 24.6 bits (51), Expect = 3.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 194 DHVGRCVVEQCFLVVRLEGPCCHQHAGQE 108
DH GRCV QC GP C A E
Sbjct: 607 DH-GRCVCGQCECREGWTGPACDCRASNE 634
>AY146755-1|AAO12070.1| 320|Anopheles gambiae odorant-binding
protein AgamOBP32 protein.
Length = 320
Score = 24.2 bits (50), Expect = 4.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 301 EQTRCYYYNYGSIPVS 348
E RCYY YG+I V+
Sbjct: 133 ESFRCYYEQYGNIVVT 148
>AY146754-1|AAO12069.1| 334|Anopheles gambiae odorant-binding
protein AgamOBP33 protein.
Length = 334
Score = 24.2 bits (50), Expect = 4.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 301 EQTRCYYYNYGSIPVS 348
E RCYY YG+I V+
Sbjct: 133 ESFRCYYEQYGNIVVT 148
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 444 STCRPTSTLTISSASCDLLPLTPPVCTP 527
+T P ST T ++ + TPP C P
Sbjct: 119 ATVAPKSTTTTTTTTVKPTTTTPPPCPP 146
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 444 STCRPTSTLTISSASCDLLPLTPPVCTP 527
+T P ST T ++ + TPP C P
Sbjct: 119 ATVAPKSTTTTTTTTVKPTTTTPPPCPP 146
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 444 STCRPTSTLTISSASCDLLPLTPPVCTP 527
+T P ST T ++ + TPP C P
Sbjct: 119 ATVAPKSTTTTTTTTVKPTTTTPPPCPP 146
>AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 444 STCRPTSTLTISSASCDLLPLTPPVCTP 527
+T P ST T ++ + TPP C P
Sbjct: 119 ATVAPKSTTTTTTTTVKPTTTTPPPCPP 146
>AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding
protein AgamOBP30 protein.
Length = 289
Score = 23.8 bits (49), Expect = 5.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 301 EQTRCYYYNYGSIPVS 348
E RCYY +YG++ V+
Sbjct: 149 ESFRCYYEHYGNLVVT 164
>AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding
protein OBPjj83c protein.
Length = 273
Score = 23.8 bits (49), Expect = 5.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 301 EQTRCYYYNYGSIPVS 348
E RCYY +YG++ V+
Sbjct: 133 ESFRCYYEHYGNLVVT 148
>AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding
protein 1 protein.
Length = 289
Score = 23.8 bits (49), Expect = 5.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 301 EQTRCYYYNYGSIPVS 348
E RCYY +YG++ V+
Sbjct: 149 ESFRCYYEHYGNLVVT 164
>AY146752-1|AAO12067.1| 277|Anopheles gambiae odorant-binding
protein AgamOBP35 protein.
Length = 277
Score = 23.4 bits (48), Expect = 7.2
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +1
Query: 265 PQHC-GEIKDFICEQTRCYYYNYGSI 339
PQ C GE +CYY NYG++
Sbjct: 115 PQECNGEPCVQAYRAFQCYYQNYGTL 140
>AY146751-1|AAO12066.1| 277|Anopheles gambiae odorant-binding
protein AgamOBP36 protein.
Length = 277
Score = 23.4 bits (48), Expect = 7.2
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +1
Query: 265 PQHC-GEIKDFICEQTRCYYYNYGSI 339
PQ C GE +CYY NYG++
Sbjct: 115 PQECNGEPCVQAYRAFQCYYQNYGTL 140
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.0 bits (47), Expect = 9.5
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 75 LLTTCGDCPS-MLLPSMLMTAWTL*TYHKEALLHNAPP 185
LL T +C M+ S+++T L +H+ A +H PP
Sbjct: 293 LLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPP 330
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.0 bits (47), Expect = 9.5
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 75 LLTTCGDCPS-MLLPSMLMTAWTL*TYHKEALLHNAPP 185
LL T +C M+ S+++T L +H+ A +H PP
Sbjct: 293 LLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPP 330
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 23.0 bits (47), Expect = 9.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 545 NKALVLRCADWRRQGKKVAA 486
NKA++L A W + KKV +
Sbjct: 73 NKAVLLSSAKWEQMWKKVVS 92
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 23.0 bits (47), Expect = 9.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 459 WVGRCSERGGGGEDDVI 409
+VG C G GEDD I
Sbjct: 1831 FVGLCGTNNGEGEDDFI 1847
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,898
Number of Sequences: 2352
Number of extensions: 15906
Number of successful extensions: 135
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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