Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00193
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74030-4|CAA98436.1|  113|Caenorhabditis elegans Hypothetical pr...    31   0.82 
Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical pr...    31   0.82 
U61946-5|AAC24389.1|  391|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AC084197-42|AAU87806.2|  544|Caenorhabditis elegans Acetylcholin...    29   2.5  
U29537-1|AAK31507.1|  610|Caenorhabditis elegans Vaccinia relate...    29   3.3  
AF040651-4|AAB95014.1|  234|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p...    29   4.4  
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical...    29   4.4  
AL023851-1|CAA19554.1|  149|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z81478-2|CAB03933.1|  195|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z74030-4|CAA98436.1|  113|Caenorhabditis elegans Hypothetical
           protein D1054.7 protein.
          Length = 113

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 5   WTSGNNLGTDMFLWMSTGLPFNAT 76
           WT G+  GTD F+W  TG P NA+
Sbjct: 57  WTDGSTTGTDGFIW-ETGEPNNAS 79


>Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical
           protein T27D12.3 protein.
          Length = 146

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 5   WTSGNNLGTDMFLWMSTGLPFNATFN 82
           WT G+  GTD F+W  TG P N  +N
Sbjct: 119 WTDGSTTGTDGFIW-KTGDPNNYLYN 143


>U61946-5|AAC24389.1|  391|Caenorhabditis elegans Hypothetical
           protein F47C12.2 protein.
          Length = 391

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 229 LHRAQSSDLHWEPQHCGEIKDFICEQTRCYYYNY 330
           L + +  DL W    C  ++ F+CE+  C   +Y
Sbjct: 155 LGKVERKDLEWRLDTCNLLRRFVCERPACVQGSY 188


>AC084197-42|AAU87806.2|  544|Caenorhabditis elegans Acetylcholine
           receptor protein 25 protein.
          Length = 544

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
 Frame = +2

Query: 491 RPSSLDASSLHTSRLAPCSNPHRKSTPTIRELRTLIPAINDQDQKEEPTQGP----YEDD 658
           R + LD   + T  ++  +    K TPT     T++  +N   + EEP         EDD
Sbjct: 372 RQTRLDQQRIATI-ISQITVESNKPTPTFPRRVTIVDEVNSDGEAEEPLPPDEVIREEDD 430

Query: 659 EGIVGDDPAAYLTNEANDAP 718
           +    DDP A+ +      P
Sbjct: 431 DVASMDDPPAWRSTTTTSQP 450


>U29537-1|AAK31507.1|  610|Caenorhabditis elegans Vaccinia related
           kinase protein 1 protein.
          Length = 610

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 551 PHRKSTPTIRELRTLIPAINDQDQKEEPTQGP 646
           P +K+TP  R  R  +   ND D  EE  + P
Sbjct: 369 PEKKATPRKRTTRKAVEVNNDSDDNEEQYENP 400


>AF040651-4|AAB95014.1|  234|Caenorhabditis elegans Hypothetical
           protein W04H10.4 protein.
          Length = 234

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 5   WTSGNNLGTDMFLWMSTGLPFNATFN 82
           WT G+  GTD F+W   G P N  +N
Sbjct: 177 WTDGSTTGTDGFIW-KAGDPNNYQYN 201


>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
            protein H38K22.1 protein.
          Length = 1570

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 530  RLAPCSNPHRKSTPTIRELRTLIPAINDQDQKEEPTQGPYEDDEGIVGDDP 682
            R AP    + K  P   + +TLI   N    K+     P E+D+  +G  P
Sbjct: 1507 RSAPTPTKNSKKAPVSPKKKTLIKETNGVSPKKNKYGLPMEEDDDSIGKTP 1557


>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
            protein H38K22.1 protein.
          Length = 1570

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 530  RLAPCSNPHRKSTPTIRELRTLIPAINDQDQKEEPTQGPYEDDEGIVGDDP 682
            R AP    + K  P   + +TLI   N    K+     P E+D+  +G  P
Sbjct: 1507 RSAPTPTKNSKKAPVSPKKKTLIKETNGVSPKKNKYGLPMEEDDDSIGKTP 1557


>AL023851-1|CAA19554.1|  149|Caenorhabditis elegans Hypothetical
           protein Y68A4B.1 protein.
          Length = 149

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 5   WTSGNNLGTDMFLWMSTGLPFNATFNY 85
           WT G+  GTD FLW + G P N    Y
Sbjct: 87  WTDGSTTGTDGFLWRN-GDPNNGGIYY 112


>Z81478-2|CAB03933.1|  195|Caenorhabditis elegans Hypothetical
           protein C31G12.2 protein.
          Length = 195

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 5   WTSGNNLGTDMFLWMSTGLPFNA 73
           WT G+  GTD ++W S G P NA
Sbjct: 138 WTDGSTTGTDGWIWRS-GEPNNA 159


>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical protein
            C09G5.8 protein.
          Length = 1531

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +2

Query: 485  KLRPSSLDASSLHTSR--LAPCSNPHRKSTPTIRELRTLIPAINDQDQKEEPTQGPYEDD 658
            +L   S D S  H+S+   +P +NP         E+  + PA+ D D +EE  +  ++DD
Sbjct: 1097 RLSTDSSDTSFSHSSKDLFSPPTNPQTYDY----EIPAVTPALVDSDGEEEADRIVFDDD 1152

Query: 659  E 661
            +
Sbjct: 1153 D 1153


>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical protein
            C09G5.8 protein.
          Length = 1531

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +2

Query: 485  KLRPSSLDASSLHTSR--LAPCSNPHRKSTPTIRELRTLIPAINDQDQKEEPTQGPYEDD 658
            +L   S D S  H+S+   +P +NP         E+  + PA+ D D +EE  +  ++DD
Sbjct: 1097 RLSTDSSDTSFSHSSKDLFSPPTNPQTYDY----EIPAVTPALVDSDGEEEADRIVFDDD 1152

Query: 659  E 661
            +
Sbjct: 1153 D 1153


>AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical
           protein Y102A5C.16 protein.
          Length = 200

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 5   WTSGNNLGTDMFLWMSTGLPFNATFN 82
           WT G+  G+D F+W     P N + N
Sbjct: 143 WTDGSATGSDAFIWNVATEPNNGSLN 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,966,267
Number of Sequences: 27780
Number of extensions: 341373
Number of successful extensions: 1088
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)