Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00192
         (731 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    43   0.009
UniRef50_Q0IIJ7 Cluster: Hypothetical LOC509055; n=4; Laurasiath...    34   4.1  
UniRef50_Q1DPJ6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.5  
UniRef50_A6RME7 Cluster: Putative uncharacterized protein; n=2; ...    33   5.5  
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    33   7.2  
UniRef50_UPI0000E47E88 Cluster: PREDICTED: similar to v-erb-a er...    33   9.5  
UniRef50_Q5V6C6 Cluster: Bacterio-opsin activator-like protein; ...    33   9.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 42.7 bits (96), Expect = 0.009
 Identities = 21/29 (72%), Positives = 23/29 (79%)
 Frame = -2

Query: 358 NPQTQPTEFLDGSSQWVPFPRSDGRFCEA 272
           NP+TQP +FL GSSQ   F RSDGRFCEA
Sbjct: 69  NPKTQPMKFLAGSSQSSRF-RSDGRFCEA 96


>UniRef50_Q0IIJ7 Cluster: Hypothetical LOC509055; n=4;
           Laurasiatheria|Rep: Hypothetical LOC509055 - Bos taurus
           (Bovine)
          Length = 388

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 23/60 (38%), Positives = 26/60 (43%)
 Frame = -2

Query: 517 TENLKNHIHNPRPCRLNFTSTTMGITIKIKSVTVSFRFASLHHCSDEGLDE*INPQTQPT 338
           T  L N    P    +   STTMGIT K    TVS   AS  H S     E   P T+P+
Sbjct: 210 TPTLLNTTPEPASPTVASMSTTMGITTKAPEPTVSTAAASTAHTSPAPTVEATTPTTRPS 269


>UniRef50_Q1DPJ6 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 740

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -1

Query: 485 ETLPSEFHINHHGYHNQNQVSDGQF*VCQPSSLQRRRARR 366
           ++ P EFHI+HH YH    VS  +    QP++ +R+R R+
Sbjct: 305 QSAPQEFHIHHH-YHTAVPVSASRKDRSQPATHRRQRRRK 343


>UniRef50_A6RME7 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 454

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = -1

Query: 548 LRKSVRKFRRHRKP*--KSHPQPETLPSEFHINHHGYHNQNQVSDGQF*VCQPSSLQRRR 375
           +R  V+   R+RK    K +P+ ET PS+   N  G HN N +    F       LQR+R
Sbjct: 291 IRDGVQSTTRYRKGTGSKKYPKSETTPSQ---NFLGRHNYNAIKKPSFHSVGKGKLQRQR 347

Query: 374 ARRVN*PTDTAH*VSRRILSVGSVS 300
            R      D++   SRR+LS  S S
Sbjct: 348 GR-----DDSS---SRRMLSTSSRS 364


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -3

Query: 381 TKGSTSKLTHRHSPLSFSTDPLSGFRFR 298
           T G +++  HR  PLSFS D LSG RFR
Sbjct: 383 TTGHSTENEHRCCPLSFSPDLLSGSRFR 410


>UniRef50_UPI0000E47E88 Cluster: PREDICTED: similar to v-erb-a
           erythroblastic leukemia viral oncogene homolog 4 isoform
           JM-a/CVT-2 precursor; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to v-erb-a
           erythroblastic leukemia viral oncogene homolog 4 isoform
           JM-a/CVT-2 precursor - Strongylocentrotus purpuratus
          Length = 1077

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +2

Query: 56  RHRSERNVLS*LSRPLYRFAFGSQS-EDCPNTVL 154
           R+  +RN  + +  P +R+++GS+  +DCPN VL
Sbjct: 279 RYEYDRNTFTNVENPNFRYSYGSRCLKDCPNNVL 312


>UniRef50_Q5V6C6 Cluster: Bacterio-opsin activator-like protein;
           n=1; Haloarcula marismortui|Rep: Bacterio-opsin
           activator-like protein - Haloarcula marismortui
           (Halobacterium marismortui)
          Length = 1054

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 57  GTDQRETFCHDLADRYIGSPLALNPKTVRTRCFF 158
           G D R+    D  DRY+G+PL +      T CF+
Sbjct: 420 GDDSRDHMWDDKVDRYLGTPLTVGGSIYGTLCFY 453


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,881,924
Number of Sequences: 1657284
Number of extensions: 11548971
Number of successful extensions: 24058
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24037
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)