Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00192
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   4.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   7.8  

>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 266 E*CFAESTIGSRKRNPLRGSVEKLS 340
           E CF    I  R+ N + GS+E+ S
Sbjct: 88  EDCFLLDGILERRSNDIAGSIEEFS 112


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 266 E*CFAESTIGSRKRNPLRGSVEKLS 340
           E CF    I  R+ N + GS+E+ S
Sbjct: 321 EDCFLLDGILERRSNDIAGSIEEFS 345


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 266 E*CFAESTIGSRKRNPLRGSVEKLS 340
           E CF    I  R+ N + GS+E+ S
Sbjct: 321 EDCFLLDGILERRSNDIAGSIEEFS 345


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = +3

Query: 504 LRFSVSSKFTNAFAQFFKIINRIKK*LYTLYALLCI*CLKRITKYYITYSLSHRWACYLT 683
           L F V    +N   Q  KI   ++    T Y +     + R+ ++    SL+H    + T
Sbjct: 473 LEFDVKC-VSNYTKQQSKIHLIVRSVFVTTYLMFDYCTVLRVQRFNNYQSLAHYLRVFFT 531

Query: 684 IFN 692
           +FN
Sbjct: 532 VFN 534


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 160 KKKHRVRTVFGLRAKGE 110
           +KKH ++ VFG+   GE
Sbjct: 89  QKKHILKNVFGVAYPGE 105


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 160 KKKHRVRTVFGLRAKGE 110
           +KKH ++ VFG+   GE
Sbjct: 89  QKKHILKNVFGVAYPGE 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,297
Number of Sequences: 336
Number of extensions: 2966
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)