Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00192
         (731 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    31   0.008
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    25   0.97 

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 31.5 bits (68), Expect = 0.008
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -1

Query: 596 VKCI*LFFYSINNFKKLRKSVRKFRRHRKP*KSHPQPETLPSEFHINHHGY 444
           + CI + F   N FK LR   RK R +RKP     +P ++         GY
Sbjct: 354 IPCIIMVFLYYNIFKALRNRARKARANRKPNLGDIKPGSIIENIAHTRSGY 404


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 496 IHNPRPCRLNFTSTTMGITIKIKSVTVSFRFASLHHCS 383
           + NPRPC +  TS T   T++     ++  + +L+  S
Sbjct: 189 LKNPRPCNVLATSLTEPYTLRNYGRRINCTYVALYPSS 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,896
Number of Sequences: 438
Number of extensions: 3364
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)