Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00191
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    25   0.45 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   7.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.7  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 512 TNDQTMTSSTYKNSECYNNTPKY 444
           ++ Q + S+T   + CYNN P Y
Sbjct: 237 SSSQPVLSTTNSTTNCYNNYPYY 259


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 535 TLKLVQVATKVGKYFKIT 588
           + KL+++  KVG +F IT
Sbjct: 2   SFKLLRLVLKVGHFFAIT 19


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 535 TLKLVQVATKVGKYFKIT 588
           + KL+++  KVG +F IT
Sbjct: 2   SFKLLRLVLKVGHFFAIT 19


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -2

Query: 648 YEYHVKLFFRCIYLVV*R*SCYFKVFTYFRCNL 550
           Y Y++ L F C +++      +     YF C L
Sbjct: 260 YFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCAL 292


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 478 KIQNVITIRLNIFHIITFLYN*NTRTKAFLNF 383
           K  N+I + LN+ +++T      T+   F+ F
Sbjct: 350 KTTNIIILGLNVVYVVTAWICAITKRDMFVEF 381


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 663 FSWHTYEYHVKLF 625
           F WHTY + V  F
Sbjct: 155 FGWHTYIFDVPNF 167


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 478 KIQNVITIRLNIFHIITFLYN*NTRTKAFLNF 383
           K  N+I + LN+ +++T      T+   F+ F
Sbjct: 75  KTTNIIILGLNVVYVVTAWICAITKRDMFVEF 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,709
Number of Sequences: 336
Number of extensions: 3225
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)