Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00191
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034550-3|CAI42261.1|  436|Homo sapiens chromosome 20 open read...    59   1e-08
AK056286-1|BAB71138.1|  436|Homo sapiens protein ( Homo sapiens ...    59   1e-08
CR456730-1|CAG33011.1|  422|Homo sapiens NOL4 protein.                 59   2e-08
BT006763-1|AAP35409.1|  422|Homo sapiens nucleolar protein 4 pro...    59   2e-08
BC000313-1|AAH00313.1|  422|Homo sapiens NOL4 protein protein.         59   2e-08
AB017800-1|BAA34576.1|  524|Homo sapiens nolp protein.                 59   2e-08
AB015339-1|BAA34797.1|  303|Homo sapiens HRIHFB2255 protein.           59   2e-08
AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy ch...    30   9.1  
AC104600-1|AAY24051.1| 1270|Homo sapiens unknown protein.              30   9.1  
AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.     30   9.1  

>AL034550-3|CAI42261.1|  436|Homo sapiens chromosome 20 open reading
           frame 112 protein.
          Length = 436

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = +1

Query: 97  KLSGPEVGAVRQLITGYRESAAFLLRSADELETLLLNQ 210
           +LS  E+ AVRQLI GYRESAAFLLRSADELE L+L Q
Sbjct: 398 QLSPTEISAVRQLIAGYRESAAFLLRSADELENLILQQ 435


>AK056286-1|BAB71138.1|  436|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31724 fis, clone NT2RI2006703, moderately
           similar to Homo sapiens nolp mRNA. ).
          Length = 436

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = +1

Query: 97  KLSGPEVGAVRQLITGYRESAAFLLRSADELETLLLNQ 210
           +LS  E+ AVRQLI GYRESAAFLLRSADELE L+L Q
Sbjct: 398 QLSPTEISAVRQLIAGYRESAAFLLRSADELENLILQQ 435


>CR456730-1|CAG33011.1|  422|Homo sapiens NOL4 protein.
          Length = 422

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +1

Query: 97  KLSGPEVGAVRQLITGYRESAAFLLRSADELETLLLNQ 210
           +LS  E+ AVRQL+ GYRESAAFLLRSADELE L+L Q
Sbjct: 384 QLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQ 421


>BT006763-1|AAP35409.1|  422|Homo sapiens nucleolar protein 4
           protein.
          Length = 422

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +1

Query: 97  KLSGPEVGAVRQLITGYRESAAFLLRSADELETLLLNQ 210
           +LS  E+ AVRQL+ GYRESAAFLLRSADELE L+L Q
Sbjct: 384 QLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQ 421


>BC000313-1|AAH00313.1|  422|Homo sapiens NOL4 protein protein.
          Length = 422

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +1

Query: 97  KLSGPEVGAVRQLITGYRESAAFLLRSADELETLLLNQ 210
           +LS  E+ AVRQL+ GYRESAAFLLRSADELE L+L Q
Sbjct: 384 QLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQ 421


>AB017800-1|BAA34576.1|  524|Homo sapiens nolp protein.
          Length = 524

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +1

Query: 97  KLSGPEVGAVRQLITGYRESAAFLLRSADELETLLLNQ 210
           +LS  E+ AVRQL+ GYRESAAFLLRSADELE L+L Q
Sbjct: 486 QLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQ 523


>AB015339-1|BAA34797.1|  303|Homo sapiens HRIHFB2255 protein.
          Length = 303

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +1

Query: 97  KLSGPEVGAVRQLITGYRESAAFLLRSADELETLLLNQ 210
           +LS  E+ AVRQL+ GYRESAAFLLRSADELE L+L Q
Sbjct: 265 QLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQ 302


>AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy chain 7
            protein.
          Length = 4024

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 112  EVGAVRQLITGYRESAAFLLRSADELETLL 201
            E  AV  +I  YRE+  F+L S DE++ LL
Sbjct: 911  EWDAVEFVIHSYRETGTFILASVDEIQMLL 940


>AC104600-1|AAY24051.1| 1270|Homo sapiens unknown protein.
          Length = 1270

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 112 EVGAVRQLITGYRESAAFLLRSADELETLL 201
           E  AV  +I  YRE+  F+L S DE++ LL
Sbjct: 906 EWDAVEFVIHSYRETGTFILASVDEIQMLL 935


>AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.
          Length = 4031

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 112  EVGAVRQLITGYRESAAFLLRSADELETLL 201
            E  AV  +I  YRE+  F+L S DE++ LL
Sbjct: 918  EWDAVEFVIHSYRETGTFILASVDEIQMLL 947


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,884,495
Number of Sequences: 237096
Number of extensions: 1566415
Number of successful extensions: 1975
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1975
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)