Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00189
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   0.75 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.7  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    22   3.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.0  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   5.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.0  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   9.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.2  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   9.2  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 47  ELDRGRSATDGKPDTKENKPNHKMS-KALGTSAKRIQKELAEI 172
           E D+  S T+G PD  + +P    S K L   +K I  E  E+
Sbjct: 276 EKDKPNSTTNGSPDVIKVEPELSDSEKTLCNGSKGISPEQEEL 318


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -2

Query: 473 LQSVRSEHLESNTLDIVRAG 414
           L+S++  HL+ NT++++  G
Sbjct: 65  LRSLKKVHLQDNTIEMIHRG 84


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/27 (29%), Positives = 11/27 (40%)
 Frame = -3

Query: 118 HFMVWFVLFRVWFAVCCTSASIQFHCL 38
           HF   F++F +    CC       H L
Sbjct: 168 HFFCAFIIFTMHLLFCCAFIFFNMHLL 194


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 301 SPEYPFKPPKVTFRTRI 351
           S +YP K  +V F+TR+
Sbjct: 59  SSKYPIKRKRVRFQTRV 75


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 428 YPKYYSQDV 454
           YP YY+QDV
Sbjct: 361 YPSYYNQDV 369


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 430 ILLELETSCLSGCLNISLP 374
           ILL L  S +SGCL  + P
Sbjct: 9   ILLVLSESLVSGCLITNCP 27


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 70  CTSASIQFHCLMNQMHQTLSY 8
           C   SIQ+ CLM +   TL +
Sbjct: 377 CDINSIQYFCLMARCLNTLIF 397


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 56  RGRSATDGKPDTKENKPN 109
           +G S T+GK   +  +PN
Sbjct: 67  QGSSLTEGKRSKRSKRPN 84


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -3

Query: 316 TGILVKNECLGRILLLHTLSLWPKDGRHPFIQIISFWSCT 197
           T ++  N  + +  + +  + +P    HPF+    F SCT
Sbjct: 736 TSLVESNRNVPQKCIFNGQAYFPGSRFHPFLIPTGFDSCT 775


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 141 PRGFKRNWQKLHWTHHQTAV 200
           PR F     KLH   HQT +
Sbjct: 32  PRHFNPPSDKLHHPIHQTVI 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,274
Number of Sequences: 336
Number of extensions: 3552
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)