Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00189
(543 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 122 2e-28
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 87 1e-17
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 84 8e-17
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 82 3e-16
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 69 2e-12
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 56 1e-08
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 56 2e-08
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 44 6e-05
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 37 0.012
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_47222| Best HMM Match : UQ_con (HMM E-Value=5) 34 0.065
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.086
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_59485| Best HMM Match : Dickkopf_N (HMM E-Value=0.2) 31 0.61
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 31 0.61
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_45563| Best HMM Match : TMS_TDE (HMM E-Value=2.2e-10) 28 4.3
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 28 4.3
SB_41195| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 27 9.9
SB_38941| Best HMM Match : Remorin_C (HMM E-Value=0.25) 27 9.9
SB_34278| Best HMM Match : DUF1605 (HMM E-Value=3.6) 27 9.9
SB_23765| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 122 bits (294), Expect = 2e-28
Identities = 61/83 (73%), Positives = 65/83 (78%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISK 435
GSVYEGGVFFLDIHF +YPFKPPK G++CLDILKD+WSPALTISK
Sbjct: 136 GSVYEGGVFFLDIHFPSDYPFKPPK---------------GMVCLDILKDSWSPALTISK 180
Query: 436 VLLSRCSLLTDCNPADPLVGSIA 504
VLLS CSLLTDCNPADPLVGSIA
Sbjct: 181 VLLSICSLLTDCNPADPLVGSIA 203
Score = 83.8 bits (198), Expect = 8e-17
Identities = 39/67 (58%), Positives = 45/67 (67%)
Frame = +2
Query: 53 DRGRSATDGKPDTKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEW 232
+ G S K + +K T+AKRIQ+EL EITLDPPPNCSAGPKGD+LYEW
Sbjct: 68 NEGPSRPPPKQRESRKSSSRFTAKNQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEW 127
Query: 233 VSTILGP 253
STILGP
Sbjct: 128 YSTILGP 134
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 86.6 bits (205), Expect = 1e-17
Identities = 45/89 (50%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Frame = +1
Query: 250 ATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL----KDNWSP 417
A G+ Y G+F LDI YPF+PPKV F T IYH NI+S G ICLD L K W P
Sbjct: 5 AEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKP 64
Query: 418 ALTISKVLLSRCSLLTDCNPADPLVGSIA 504
AL IS VL + L+ + NP DPL+ I+
Sbjct: 65 ALNISSVLSTILILMAEPNPDDPLMAEIS 93
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 83.8 bits (198), Expect = 8e-17
Identities = 39/67 (58%), Positives = 45/67 (67%)
Frame = +2
Query: 53 DRGRSATDGKPDTKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEW 232
+ G S K + +K T+AKRIQ+EL EITLDPPPNCSAGPKGD+LYEW
Sbjct: 108 NEGPSRPPPKQRESRKSSSRFTAKNQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEW 167
Query: 233 VSTILGP 253
STILGP
Sbjct: 168 YSTILGP 174
Score = 54.8 bits (126), Expect = 4e-08
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPK 330
GSVYEGGVFFLDIHF +YPFKPPK
Sbjct: 176 GSVYEGGVFFLDIHFPSDYPFKPPK 200
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILK-DNWSPALTISKVL 441
Y G F ++I F EYPFKPPK+TF+T+IYH NI+ +G +CL I+ +NW PA +V+
Sbjct: 37 YNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPIISPENWKPATKTEQVI 96
Query: 442 LSRCSLLTDCNPADPLVGSIA 504
+ +L+ D P PL +A
Sbjct: 97 QALLALVHDPEPEHPLRADLA 117
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 68.9 bits (161), Expect = 2e-12
Identities = 36/68 (52%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Frame = +1
Query: 313 PFKPPKVTFRTRIYHCNINSQGVICLDIL----KDNWSPALTISKVLLSRCSLLTDCNPA 480
PF+PPKV F T IYH NI+S G ICLD L K W PAL IS VL + L+ + NP
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMAEPNPD 99
Query: 481 DPLVGSIA 504
DPL+ I+
Sbjct: 100 DPLMAEIS 107
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 56.4 bits (130), Expect = 1e-08
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKV 333
GSVYEGGVFFLDIHF +YPFKPPKV
Sbjct: 63 GSVYEGGVFFLDIHFPTDYPFKPPKV 88
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +2
Query: 197 SAGPKGDNLYEWVSTILGP 253
SAGPKGD LYEW STILGP
Sbjct: 43 SAGPKGDKLYEWYSTILGP 61
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 55.6 bits (128), Expect = 2e-08
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL------------ 399
G++Y GG F + F +YP+ PP F T+++H NI G +C+ IL
Sbjct: 1166 GTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYESGDVCISILHPPVDDPQSGEL 1225
Query: 400 -KDNWSPALTISKVLLSRCSLLTDCNPADP 486
+ W+P + +LLS SLL + N P
Sbjct: 1226 PSERWNPTQNVRTILLSVISLLNEPNTFSP 1255
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL------------ 399
G+ YE G F + F EYP +PP +TF + I+H N++ G +C+ IL
Sbjct: 374 GTYYEEGYFKASMVFPKEYPQRPPTLTFISDIWHPNVHKNGEVCISILHEPGEDKYGYEK 433
Query: 400 -KDNWSPALTISKVLLSRCSLLTDCNPADP 486
+ W P T+ ++LS S+L + N P
Sbjct: 434 ADERWRPIHTVETIMLSVISMLAEPNDESP 463
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +1
Query: 337 FRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSRCSLLTDCNPADPL 489
F T+I+H N+ G IC++ LK +W P L I +VLL+ LL NP L
Sbjct: 147 FLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESAL 197
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = +1
Query: 253 TGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTIS 432
T Y GG F + + +YP P + +T+IYH N++ +C+ +L D+W + +
Sbjct: 46 TDGAYRGGQFKFSVR-TTDYPNVAPSINCKTKIYHPNMDGYDGVCMSLL-DDWQASNDLE 103
Query: 433 KVLLSRCSLLTDCNPADPL 489
++ L + N DPL
Sbjct: 104 DLVQGLLFLFYNPNLEDPL 122
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTR-----IYHCNINSQGVICLDILKD 405
YEGG F+ I P+YP +PP+V T ++ N+ G +CL I+ D
Sbjct: 25 YEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYRNGKVCLSIIGD 76
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 409 WSPALTISKVLLSRCSLLTDCNPADPLVGSIA 504
WSPAL I VLLS +LL+ NP DPL +A
Sbjct: 3 WSPALQIRTVLLSIQALLSAPNPDDPLANDVA 34
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 35.5 bits (78), Expect = 0.028
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQG 378
+V+E ++ L I P YP KPP V F ++I +NS+G
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 35.5 bits (78), Expect = 0.028
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQG 378
+V+E ++ L I P YP KPP V F ++I +NS+G
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_47222| Best HMM Match : UQ_con (HMM E-Value=5)
Length = 46
Score = 34.3 bits (75), Expect = 0.065
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = +1
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYRIGK 528
LLS CSLL D NP DPLV IA IY+ K
Sbjct: 2 LLSICSLLCDPNPDDPLVPDIA-RIYKTDK 30
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 33.9 bits (74), Expect = 0.086
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 286 LDIHFSPEYPFKPPKVTFRTRIYHCN-INSQGVICLDIL-KDNWSPALTISKVLL 444
L++ F+ ++PF PP V + + S G IC+++L WS A TI V++
Sbjct: 575 LNMTFTDKFPFDPPFVRVCYPVIQAGYVLSGGAICMELLTPQGWSSAYTIEAVIV 629
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL---KDNWSPALTISK 435
+ GG + I PEYP KPP + T I + ICL + + W P+ +I
Sbjct: 53 FAGGRYHGRIILPPEYPMKPPSIMLLTPNGRFEIGKK--ICLSMSAHHPETWQPSWSIRT 110
Query: 436 VLLS 447
VL++
Sbjct: 111 VLMA 114
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
+ KR+ +E E+ + A P DNL+EW T+ GP
Sbjct: 11 AVKRLMREAKELR-NATELYHAQPLEDNLFEWHFTVRGP 48
>SB_59485| Best HMM Match : Dickkopf_N (HMM E-Value=0.2)
Length = 450
Score = 31.1 bits (67), Expect = 0.61
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 244 DGRHPFIQIISFWSCTAVWW--WVQCNFCQFLLNPLGRCAESL 122
DG F+ ++ + SCT W+ +C +F+ LG C E+L
Sbjct: 72 DGNIRFVFVLEYKSCTVCWYSGMFECRKYKFIERFLGFCVENL 114
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 31.1 bits (67), Expect = 0.61
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPK 330
+EGG + LDI YPF PPK
Sbjct: 701 FEGGTYNLDIVIPETYPFNPPK 722
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKV-TFRTRIYHC 360
G+ YEGGV+ + + +YPFK P + F I C
Sbjct: 59 GTPYEGGVWKVRVDLPEKYPFKSPSIANFTIEISVC 94
>SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 23 VHLVHQAVELDRGRSATDGKPDTKENKPNHKMSKALGTSAKRIQKELAEI 172
VHLV + V+ +G+S D + + + SKA ++ KR +K L+++
Sbjct: 175 VHLVKETVKEVKGKSLEDVARSAVQTQVESQGSKAQSSTEKRGEKTLSKV 224
>SB_45563| Best HMM Match : TMS_TDE (HMM E-Value=2.2e-10)
Length = 246
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -3
Query: 292 CLGRILLLHTLSLW--PKDGRHPFIQIISFWSCTAVW 188
CL + + T++ W P++G H +++IS W AVW
Sbjct: 171 CLAALYSMMTITDWYRPEEGEHLSVKLISGWG--AVW 205
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRI---YHCNINSQGVICLDILKDNWSPALT 426
G+ Y+ G+F DI YP PP + + + N+ G +C+ +P L
Sbjct: 645 GTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCI-------TPFLL 697
Query: 427 ISKVLLSRCS 456
+ V +SRC+
Sbjct: 698 RNNVPVSRCN 707
>SB_41195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = +2
Query: 44 VELDRG--RSATDGKPDTKENKPNHKMSKALGTSAKRIQ--KELAEITLDPP 187
+EL RG RS T G P +E P+H S R + L LDPP
Sbjct: 3 LELHRGGGRSRTSGSPGLQEFDPDHYYSTTTRRRTDRTDPTRILDHYALDPP 54
>SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1074
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 71 TDGKPDTKENKPNHKMSKALGTSAKRIQKELAEITLDPPPN 193
++GK + + HK+S G + ++ KEL +T+ N
Sbjct: 612 SNGKDKSSREQDKHKVSSKTGVTGEKGDKELTVVTVSTSEN 652
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Frame = +2
Query: 50 LDRGRSATDGKPDTKEN------KPNHKMSKALGTSA-----KRIQKELAEITLDPPPNC 196
LD +S + PD KE +P+ ++++ + A KR+ KE +++
Sbjct: 695 LDTRKSTKEKNPDNKEKTETKIAEPSMEVARMSSSHAQRVRSKRLMKEFQDVSRKTERIF 754
Query: 197 SAGPKGDNLYEW 232
SA DNL+EW
Sbjct: 755 SAELVDDNLFEW 766
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRT 345
+ GG + I PEYP KPP + T
Sbjct: 18 FAGGRYHGRIILPPEYPMKPPSIMLLT 44
>SB_38941| Best HMM Match : Remorin_C (HMM E-Value=0.25)
Length = 377
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 30 WFIRQWNWIEAEVQQTANQTRKRTNQTIKCQRLSAHRPRGFKRN 161
W R W +EAE + Q R+R + K L+ R +R+
Sbjct: 43 WKRRAWARLEAEQRHHEEQQRRRAEELAKLAELAGEHKRYAERS 86
>SB_34278| Best HMM Match : DUF1605 (HMM E-Value=3.6)
Length = 243
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 53 DRGRSATDGKPDTKENKPNHKMSK 124
DRGRS+ D PD +E K + S+
Sbjct: 130 DRGRSSRDASPDREERKGDKDKSR 153
>SB_23765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 78 ANQTRKRTNQTIKCQRLSAHRPRGFKRNWQKLHWTHHQTAVQDQKEI 218
+ + R R Q+ K RLS+ RPR +N K H + D K +
Sbjct: 405 SQKARPRGGQSAKKPRLSSTRPRPVAKNVLKNLKVGHSSPAADSKTV 451
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,399,863
Number of Sequences: 59808
Number of extensions: 438807
Number of successful extensions: 1275
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -