Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00189
         (543 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   3.7  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   4.9  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   8.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.6  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -1

Query: 180 SNVISANSF*ILLADVPRAFDILWFGLFSFV 88
           +NVI+ +S  + + + P  +D LW G +SF+
Sbjct: 910 TNVIAVHSQTLHIPECPNGWDGLWIG-YSFL 939


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 185 PPNCSAGPKGDNLY 226
           PPN  AG  GD LY
Sbjct: 38  PPNSMAGDYGDELY 51


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +3

Query: 57  EAEVQQTANQTRKRTNQTIKCQRLSAHRPRGFKRNWQKLHWTHHQTAVQDQK 212
           E   QQ  +Q R++  Q  + Q+    + +  +RN Q+  W   Q   Q Q+
Sbjct: 221 EQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQR-EWQQQQQQQQHQQ 271


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 449  LESNTLDIVRAGDQLSFRMSKHIT 378
            ++S ++ + R GD + F  SKH +
Sbjct: 1586 VKSQSIAVPREGDMVVFHSSKHFS 1609


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 449  LESNTLDIVRAGDQLSFRMSKHIT 378
            ++S ++ + R GD + F  SKH +
Sbjct: 1587 VKSQSIAVPREGDMVVFHSSKHFS 1610


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,570
Number of Sequences: 2352
Number of extensions: 14627
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)