Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00189
(543 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 132 1e-31
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 132 1e-31
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 93 9e-20
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 87 6e-18
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 80 9e-16
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 80 9e-16
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 77 6e-15
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 74 6e-14
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 70 9e-13
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 63 1e-10
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 62 2e-10
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 62 3e-10
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 62 3e-10
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 62 3e-10
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 60 1e-09
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 58 5e-09
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 56 2e-08
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 54 7e-08
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 49 2e-06
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 47 8e-06
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 44 5e-05
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 40 9e-04
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 38 0.005
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 38 0.006
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 36 0.025
Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical pr... 33 0.10
U29535-11|AAK31456.1| 947|Caenorhabditis elegans Hypothetical p... 30 0.94
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 29 1.6
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 29 1.6
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 29 1.6
Z78412-3|CAB01651.2| 236|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical... 29 2.2
U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.9
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 29 2.9
AL132860-29|CAB60505.2| 386|Caenorhabditis elegans Hypothetical... 28 3.8
U23454-3|AAC46518.1| 192|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF016439-5|AAB65900.1| 630|Caenorhabditis elegans Hypothetical ... 28 5.0
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 27 6.6
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 27 8.7
AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 27 8.7
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 27 8.7
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 27 8.7
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 132 bits (320), Expect = 1e-31
Identities = 64/87 (73%), Positives = 68/87 (78%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y+GGVFFL IHF +YPFKPPKV F TRIYH NINS G ICLDIL+ WSPALTISKV
Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKV 102
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYR 519
LLS CSLL D NP DPLV IA IY+
Sbjct: 103 LLSICSLLCDPNPDDPLVPEIA-RIYK 128
Score = 57.6 bits (133), Expect = 5e-09
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
KRIQKEL ++ DPP CSAGP GD+L+ W +TI+GP
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGP 40
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 132 bits (320), Expect = 1e-31
Identities = 64/87 (73%), Positives = 68/87 (78%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y+GGVFFL IHF +YPFKPPKV F TRIYH NINS G ICLDIL+ WSPALTISKV
Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKV 102
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYR 519
LLS CSLL D NP DPLV IA IY+
Sbjct: 103 LLSICSLLCDPNPDDPLVPEIA-RIYK 128
Score = 57.6 bits (133), Expect = 5e-09
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
KRIQKEL ++ DPP CSAGP GD+L+ W +TI+GP
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGP 40
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 93.5 bits (222), Expect = 9e-20
Identities = 46/82 (56%), Positives = 54/82 (65%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S + GGVF L++ EYP PKV F T+IYH NI+ G ICLDILKD WSPAL I V
Sbjct: 46 SPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTV 105
Query: 439 LLSRCSLLTDCNPADPLVGSIA 504
LLS +LL+ NP DPL +A
Sbjct: 106 LLSIQALLSAPNPEDPLATDVA 127
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 131 GTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
G +RI KE + DP P SA P N + I GP
Sbjct: 3 GQLPRRIIKETQRLLADPVPGISANPDESNARYFHVMIAGP 43
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 87.4 bits (207), Expect = 6e-18
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQ-GVICLDILKDNWSPALTISKVL 441
Y GG+F LDI +YPF PP V F T+I+H N++SQ GVICLDILKD W+ +LT+ VL
Sbjct: 51 YAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVL 110
Query: 442 LSRCSLLTDCNPADP 486
LS +L+ P DP
Sbjct: 111 LSIQALMCTPEPKDP 125
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 80.2 bits (189), Expect = 9e-16
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLL 444
+E G F L + F+ EYP KPP V F ++++H N+ + G ICLDIL++ WSP ++ +L
Sbjct: 48 FEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILT 107
Query: 445 SRCSLLTDCNPADPLVGSIATHIYR 519
S SLL + NP P S+A +Y+
Sbjct: 108 SIQSLLDEPNPNSP-ANSLAAQLYQ 131
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPQ 256
S +R+ ++ ++ DPP S P DN+ W + I GPQ
Sbjct: 5 SRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQ 44
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 80.2 bits (189), Expect = 9e-16
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLL 444
+E G F L + F+ EYP KPP V F ++++H N+ + G ICLDIL++ WSP ++ +L
Sbjct: 48 FEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILT 107
Query: 445 SRCSLLTDCNPADPLVGSIATHIYR 519
S SLL + NP P S+A +Y+
Sbjct: 108 SIQSLLDEPNPNSP-ANSLAAQLYQ 131
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPQ 256
S +R+ ++ ++ DPP S P DN+ W + I GPQ
Sbjct: 5 SRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQ 44
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 77.4 bits (182), Expect = 6e-15
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL-KDNWSPALTISKVL 441
Y G F + I F +YPFKPPKV F T+IYH N++ +G CL I+ +NW PA +V+
Sbjct: 46 YNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVM 105
Query: 442 LSRCSLLTDCNPADPLVGSIA 504
++ SL+ + P+ P+ +A
Sbjct: 106 MALLSLINEPEPSHPIRADVA 126
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 74.1 bits (174), Expect = 6e-14
Identities = 42/93 (45%), Positives = 54/93 (58%), Gaps = 16/93 (17%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVT---------------FRTRIYHCNINSQ-GVIC 387
G+ Y GG F + + YPF+PPKVT F TRI+H NI+SQ G IC
Sbjct: 62 GTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTIC 121
Query: 388 LDILKDNWSPALTISKVLLSRCSLLTDCNPADP 486
LDILKD W+ +LT+ VLLS ++L P+DP
Sbjct: 122 LDILKDKWTASLTLRTVLLSLQAMLCSPEPSDP 154
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 70.1 bits (164), Expect = 9e-13
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Frame = +1
Query: 250 ATGSVYEGGVFFLDIHFSPEYPFKPPKVTF--RTRIYHCNINSQGVICLDILKDNWSPAL 423
A G++Y G VF L F P+YPF P+V F T H +I S G ICL IL D+W+PAL
Sbjct: 45 AEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPAL 104
Query: 424 TISKVLLSRCSLLT 465
++ V LS S+L+
Sbjct: 105 SVQSVCLSILSMLS 118
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 62.9 bits (146), Expect = 1e-10
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINS-QGVICL-DILKDNWSPALTISKV 438
YEGG+F LDI YPFK P V F T+I+H +++ G ICL D+ W ++TI KV
Sbjct: 393 YEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVWPVSMTIYKV 452
Query: 439 LLSRCSLLTDCNPADPL 489
L+ S +++ N +P+
Sbjct: 453 LIVIQSWMSNFNEKEPI 469
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKD----------- 405
++YEGG F + F +YP KPPK+ F + I+H NI+ +G +C+ IL D
Sbjct: 46 TLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERP 105
Query: 406 --NWSPALTISKVLLSRCSLLTDCNPADP 486
W P T+ +LLS S+LTD N P
Sbjct: 106 EERWLPVHTVETILLSVISMLTDPNFESP 134
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Frame = +1
Query: 229 MGVYHPWATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILK-- 402
+G+Y P T +Y+GG F I F YP+ PP + F T+++H N+ G +C+ IL
Sbjct: 44 VGIYGPPKT--LYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSP 101
Query: 403 -----------DNWSPALTISKVLLSRCSLLTDCNPADP 486
+ W+P ++ +LLS SLL + N + P
Sbjct: 102 IDDPQSGELACERWNPTQSVRTILLSVISLLNEPNTSSP 140
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 61.7 bits (143), Expect = 3e-10
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +1
Query: 244 PWATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDN--WSP 417
P +++EGG++ + + F ++P PPK F ++H N+ G +CL +L +N W P
Sbjct: 46 PGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKP 105
Query: 418 ALTISKVLLSRCSLLTDCNPADP 486
+++I ++L+ LL N DP
Sbjct: 106 SISIKQLLIGIQDLLNHPNIEDP 128
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 61.7 bits (143), Expect = 3e-10
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +1
Query: 244 PWATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDN--WSP 417
P +++EGG++ + + F ++P PPK F ++H N+ G +CL +L +N W P
Sbjct: 46 PGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKP 105
Query: 418 ALTISKVLLSRCSLLTDCNPADP 486
+++I ++L+ LL N DP
Sbjct: 106 SISIKQLLIGIQDLLNHPNIEDP 128
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNIN-SQGVICLDILKDNWSPALTISK 435
+ YE GV+ + + +YPFK P + F +I+H NI+ + G +CLD++ W+ ++
Sbjct: 45 TAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALYDLTN 104
Query: 436 VLLSRC-SLLTDCNPADPLVGSIA 504
+ + LLT N ADPL G A
Sbjct: 105 IFDTFLPQLLTYPNAADPLNGEAA 128
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 57.6 bits (133), Expect = 5e-09
Identities = 31/75 (41%), Positives = 39/75 (52%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPQAQCMKEEYSS*TFIFHQNTRLS 322
KRIQKEL ++ DPP CS G GD+LY W +TI+GP + T Q +
Sbjct: 4 KRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTITSRQTIHSN 63
Query: 323 HQR*HSEQGYIIVTS 367
HQR S + I TS
Sbjct: 64 HQRLISPLEFAIRTS 78
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 55.6 bits (128), Expect = 2e-08
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL-------------KD 405
+ GVF I F +YP PPK+ F I+H NI + G +C+ IL +
Sbjct: 49 FANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNE 108
Query: 406 NWSPALTISKVLLSRCSLLTDCNPADP 486
WSP +I K+LLS S+L + N P
Sbjct: 109 RWSPVQSIEKILLSVVSMLAEPNDESP 135
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 131 GTSAKRIQKELAEITLDPPPNCSAGP-KGDNLYEWVSTILGPQAQCMKEEYSS*TFIFHQ 307
G + KR+ E E+T PP A P DN +EW I GP+ C F Q
Sbjct: 3 GYALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQ 62
Query: 308 NTRLS 322
+ LS
Sbjct: 63 DYPLS 67
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 54.8 bits (126), Expect = 4e-08
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGV-ICLD-ILKDNWSPALTI 429
G +Y+ +F L + + EYPFKPP + F +YH N++ +C +L++NW P T+
Sbjct: 54 GVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTM 113
Query: 430 SKVLLSRCSLLTDCNPADPLVGSIATHIY 516
VLL+ LL + + + P V A H Y
Sbjct: 114 EDVLLNLIVLLNEPDLSRP-VNIDAAHDY 141
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 54.0 bits (124), Expect = 7e-08
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = +1
Query: 262 VYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDN------WSPAL 423
+Y GG F I PEY PP V T+++H NIN G ICL IL+ N W P
Sbjct: 71 IYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTR 130
Query: 424 TISKVLLSRCSLLTD 468
++ V+ SL D
Sbjct: 131 NLTDVVHGLVSLFND 145
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISK 435
YEGG++ + F ++PFKPP + T N++ +CL D D W+PA T+S
Sbjct: 52 YEGGIYMGKLLFPKDFPFKPPAILMLTPNGRFQTNTR--LCLSISDYHPDTWNPAWTVST 109
Query: 436 VLLSRCSLLTDCNPADPLVGSIAT 507
++ S + D P +GS+ T
Sbjct: 110 IITGLMSFMND---NQPTLGSLVT 130
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 116 MSKALGTSA-KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILG 250
M+ + T A +R++K+ + +P P A P N+ EW I+G
Sbjct: 1 MTSGVSTVALQRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIG 46
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 47.2 bits (107), Expect = 8e-06
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +1
Query: 244 PWATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL-KDNWSPA 420
P GS +EGG + + ++F ++P PP F+T ++H N++ +G I L +L +++WS
Sbjct: 76 PGPRGSPWEGGEYEVSVNFH-KWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQEHWSSE 134
Query: 421 LTISKVLLSRCSLL 462
++ K+L +LL
Sbjct: 135 TSLKKLLREISNLL 148
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 44.4 bits (100), Expect = 5e-05
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTR-----IYHCNINSQGVICLDIL-------KDN 408
Y G+F DI F YPF PPK F T ++ N+ + G ICL IL ++
Sbjct: 457 YANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEK 516
Query: 409 WSPALTISKVLLS 447
W+P ++ +VL+S
Sbjct: 517 WNPYCSLMQVLVS 529
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSP-EYPFKPPKVTFRTRIYHCNINSQG 378
GS+YEGG FF DI+ P + P+V F T I+H N+ G
Sbjct: 73 GSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYG 114
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 40.3 bits (90), Expect = 9e-04
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICL-DILKDNWSPALTISKVL 441
+ GG ++ + F +P+ PP +T T N++ + + D ++W+P T+S +L
Sbjct: 63 FYGGYYWGKVIFKENFPWSPPAITMITPNGRFQTNTRLCLSISDYHPESWNPGWTVSAIL 122
Query: 442 LSRCSLLTDCNPADPLVGSIA 504
+ S + + +PA GSIA
Sbjct: 123 IGLHSFMNENSPA---AGSIA 140
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 125 ALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEW 232
A ++ +R+QK+ A++ DP A P DN+ EW
Sbjct: 16 ASSSAVRRLQKDYAKLMQDPVDGIKALPNEDNILEW 51
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL---KDNWSPALT 426
G+ +EGG++ I F +YP KPP + T +N + +CL I + W P+ +
Sbjct: 50 GTDFEGGIYHGRIIFPADYPMKPPNLILLTPNGRFELNKK--VCLSISGYHPETWLPSWS 107
Query: 427 ISKVLLSRCSLL 462
I LL+ L
Sbjct: 108 IRTALLALIGFL 119
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILG 250
+R+ KE E+ P A P DNL+EW TI G
Sbjct: 13 RRLMKEAMELR-QPTEMYHAQPMEDNLFEWHFTIRG 47
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 37.5 bits (83), Expect = 0.006
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNIN-SQGVI---CLDILKDNWSPALTIS 432
YE ++ L I YP +PP V F T+++ +N S GVI L L+ NWS + I
Sbjct: 53 YESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLR-NWSNSYMIK 111
Query: 433 KVL 441
VL
Sbjct: 112 TVL 114
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 35.5 bits (78), Expect = 0.025
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNI 366
YE GVF +D+ F YP P++ F+T I++C +
Sbjct: 43 YETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAV 76
>Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical
protein C17D12.5 protein.
Length = 139
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 280 FFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSRCSL 459
+ + + P++PF PP +T +T + + L + ++ W P+ I VL+ CS+
Sbjct: 51 YIVTVAIPPKFPFSPPAITCKT--------DKNMKFLFLEENQWKPSTGIVAVLIEACSV 102
Query: 460 LT--DCNPADPLVGSI 501
++ D P P++ I
Sbjct: 103 ISRRDLVPRAPVLPRI 118
>U29535-11|AAK31456.1| 947|Caenorhabditis elegans Hypothetical
protein C25H3.11 protein.
Length = 947
Score = 30.3 bits (65), Expect = 0.94
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = +2
Query: 86 DTKENKPNHKMSKALGTSAKRIQKELAEITLDPPPN--------CSAGPKGDNLYEWVST 241
+T K + K LG +A I E A TL+PPP+ P LY W++
Sbjct: 442 ETVFRKLIREKEKELGITAAPIDTEDAFETLEPPPDEIIVDEPTAPTEPTNGGLYGWITG 501
Query: 242 ILGPQAQCMKEE 277
G Q K+E
Sbjct: 502 FFGQAQQDEKQE 513
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +3
Query: 48 NWIEAEVQQTANQTRKRTNQTIKCQRLSAHRPRGFKRNWQKLHWTHHQTAVQDQ 209
N + + QT Q ++RTN + ++ +P ++ N H H+Q Q+Q
Sbjct: 275 NMTQNQRNQTGPQNQQRTNDSRTMKQTPQQQPSQYQNNVGAAHQHHNQHGQQEQ 328
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +3
Query: 48 NWIEAEVQQTANQTRKRTNQTIKCQRLSAHRPRGFKRNWQKLHWTHHQTAVQDQ 209
N + + QT Q ++RTN + ++ +P ++ N H H+Q Q+Q
Sbjct: 275 NMTQNQRNQTGPQNQQRTNDSRTMKQTPQQQPSQYQNNVGAAHQHHNQHGQQEQ 328
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +3
Query: 48 NWIEAEVQQTANQTRKRTNQTIKCQRLSAHRPRGFKRNWQKLHWTHHQTAVQDQ 209
N + + QT Q ++RTN + ++ +P ++ N H H+Q Q+Q
Sbjct: 275 NMTQNQRNQTGPQNQQRTNDSRTMKQTPQQQPSQYQNNVGAAHQHHNQHGQQEQ 328
>Z78412-3|CAB01651.2| 236|Caenorhabditis elegans Hypothetical
protein M176.4 protein.
Length = 236
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 236 TPIHTNYLLLVLHCSLVVGPM*FLPIPFESSWPM 135
T IHT +LL +L +LV+G + F+P+ + P+
Sbjct: 108 TKIHTKFLLGMLAWALVIGQLCFIPMLADHRGPL 141
>AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical
protein F36H12.5 protein.
Length = 197
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 47 ELDRGRSATDGKPDTKENKPNHKMSKALGTSAKRIQKE 160
E D+ S DGK K+NK + K K T K+ +K+
Sbjct: 144 EFDKTLSENDGKKKKKKNKDDEKDEKKEDTDGKKDEKK 181
>U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical
protein K06C4.9 protein.
Length = 492
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = -3
Query: 169 FCQFLLNPLGRCAESL*HFMVWFVLFRVWFAVCCTSASIQFHCLMNQMHQTLSY 8
FC + P G A+ + +++ + WFAV C +Q C + + Y
Sbjct: 231 FCLVYIYPFGCMAKMIGQYIIVLIAVERWFAV-CRPLQVQVWCTQKNTIRAMLY 283
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 439 LLSRCSLLTDCNPADPLVG 495
L+SRC +L DCN D +VG
Sbjct: 324 LISRCPMLGDCNHGDLIVG 342
>AL132860-29|CAB60505.2| 386|Caenorhabditis elegans Hypothetical
protein Y56A3A.28 protein.
Length = 386
Score = 28.3 bits (60), Expect = 3.8
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +2
Query: 17 CLVHLVHQAVELDRGRSATDGKPDTKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNC 196
CL+ + V L R A + + +E + +ALG AK + ++ PPP
Sbjct: 41 CLMEAFEREVALSVSRGADEDIAENEEEWDDQPSEEALGLIAKN-EASPSKQQQPPPPPK 99
Query: 197 SAGPKGDNLYEWVSTILGPQ 256
S+ K + + I GP+
Sbjct: 100 SSPRKPEKAQKEEKVIAGPR 119
>U23454-3|AAC46518.1| 192|Caenorhabditis elegans Hypothetical
protein C10A4.4 protein.
Length = 192
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 523 LFCIYVLQYCQLKDPLDYSQLGVNILRVILWILLELETSCLSGCLNI 383
+FC + L P YS G VI W LL + +C +GC+ +
Sbjct: 64 VFCFFWLGTSIFIMPEWYSFNGHAFDFVICWFLLAIHITCTAGCITM 110
>AF016439-5|AAB65900.1| 630|Caenorhabditis elegans Hypothetical
protein R02F11.4 protein.
Length = 630
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +2
Query: 68 ATDGKPDTKENKPNHKMSKALGTS----AKRIQKELAEITLD 181
A DG+ D KEN + + + +L S + RIQ E A++ +D
Sbjct: 14 AADGEDDDKENLDDSRANSSLANSTFVTSGRIQNEKADVEVD 55
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 391 DILKDNWSPALTISKVLLSRCSLLTDCNPAD 483
D L++N +P + K + SRC + D NP+D
Sbjct: 48 DDLEENNNPRPMLPKQMESRCKHVKDINPSD 78
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -2
Query: 506 VAILPTKGSAGLQSVRSEHLESNTLDIVRA 417
++++PT L S++ HLE+N +D++R+
Sbjct: 13 LSVIPTWALTYLHSLQILHLENNRIDVLRS 42
>AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5c protein.
Length = 391
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 83 PDTKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPK 211
P T++ +HK S+ ++ R++ + PPP+ S+ K
Sbjct: 251 PATRQRATDHKESRRSEGTSTRVESAASAAAPPPPPSSSSSSK 293
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 83 PDTKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPK 211
P T++ +HK S+ ++ R++ + PPP+ S+ K
Sbjct: 386 PATRQRATDHKESRRSEGTSTRVESAASAAAPPPPPSSSSSSK 428
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 83 PDTKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPK 211
P T++ +HK S+ ++ R++ + PPP+ S+ K
Sbjct: 431 PATRQRATDHKESRRSEGTSTRVESAASAAAPPPPPSSSSSSK 473
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,348,859
Number of Sequences: 27780
Number of extensions: 336158
Number of successful extensions: 947
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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