Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00189
(543 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 142 2e-34
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 139 1e-33
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 138 2e-33
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 138 2e-33
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 138 2e-33
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 138 2e-33
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 137 4e-33
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 137 4e-33
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 137 4e-33
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 137 4e-33
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 137 4e-33
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 137 5e-33
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 130 4e-31
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 108 3e-24
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 105 3e-23
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 104 4e-23
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 100 5e-22
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 100 5e-22
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 100 5e-22
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 95 3e-20
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 94 6e-20
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 83 9e-17
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 82 3e-16
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 82 3e-16
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 82 3e-16
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 81 6e-16
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 81 6e-16
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 79 1e-15
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 79 1e-15
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 77 8e-15
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 72 2e-13
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 72 3e-13
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 71 5e-13
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 69 2e-12
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 68 5e-12
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 66 2e-11
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 63 1e-10
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 62 2e-10
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 62 2e-10
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 60 1e-09
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 58 4e-09
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 57 9e-09
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 57 9e-09
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 54 5e-08
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 52 2e-07
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 44 5e-05
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 44 9e-05
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 41 5e-04
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 41 6e-04
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 40 8e-04
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 36 0.017
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 36 0.017
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 35 0.031
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 35 0.031
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 33 0.093
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 33 0.093
At1g29400.2 68414.m03597 RNA recognition motif (RRM)-containing ... 30 1.1
At1g29400.1 68414.m03596 RNA recognition motif (RRM)-containing ... 30 1.1
At5g24470.1 68418.m02884 pseudo-response regulator 5 (APRR5) ide... 29 2.7
At5g20770.1 68418.m02468 hypothetical protein 29 2.7
At3g14630.1 68416.m01852 cytochrome P450, putative similar to GB... 29 2.7
At5g42470.1 68418.m05170 expressed protein low similarity to BRE... 28 3.5
At1g48120.1 68414.m05370 calcineurin-like phosphoesterase family... 28 3.5
At5g55550.3 68418.m06922 RNA recognition motif (RRM)-containing ... 28 4.6
At5g55550.2 68418.m06921 RNA recognition motif (RRM)-containing ... 28 4.6
At5g55550.1 68418.m06920 RNA recognition motif (RRM)-containing ... 28 4.6
At4g17620.1 68417.m02636 glycine-rich protein 28 4.6
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 27 6.1
At1g73650.3 68414.m08526 expressed protein 27 6.1
At1g73650.2 68414.m08528 expressed protein 27 6.1
At1g73650.1 68414.m08527 expressed protein 27 6.1
At1g50060.1 68414.m05617 pathogenesis-related protein, putative ... 27 6.1
At3g48780.1 68416.m05327 serine C-palmitoyltransferase, putative... 27 8.1
At1g61870.1 68414.m06981 pentatricopeptide (PPR) repeat-containi... 27 8.1
At1g11310.1 68414.m01299 seven transmembrane MLO family protein ... 27 8.1
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 142 bits (343), Expect = 2e-34
Identities = 66/91 (72%), Positives = 74/91 (81%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y GGVF ++IHF P+YPFKPPKV FRT+++H NINS G ICLDILKD WSPALTISKV
Sbjct: 43 SPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKV 102
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYRIGKS 531
LLS CSLLTD NP DPLV IA HIY+ K+
Sbjct: 103 LLSICSLLTDPNPDDPLVPEIA-HIYKTDKT 132
Score = 53.6 bits (123), Expect = 8e-08
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
+ +RI KEL E+ DPP +CSAGP G++++ W +TI+GP
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGP 40
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 139 bits (337), Expect = 1e-33
Identities = 64/91 (70%), Positives = 74/91 (81%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y GGVF + IHF P+YPFKPPKV+F+T++YH NINS G ICLDILK+ WSPALTISKV
Sbjct: 43 SPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKV 102
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYRIGKS 531
LLS CSLLTD NP DPLV IA H+Y+ +S
Sbjct: 103 LLSICSLLTDPNPDDPLVPEIA-HMYKTDRS 132
Score = 53.6 bits (123), Expect = 8e-08
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
++KRI KEL ++ DPP NCSAGP ++++ W +TI+GP
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGP 40
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 138 bits (335), Expect = 2e-33
Identities = 64/91 (70%), Positives = 73/91 (80%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y GGVF + IHF P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKV
Sbjct: 73 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 132
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYRIGKS 531
LLS CSLLTD NP DPLV IA H+Y+ K+
Sbjct: 133 LLSICSLLTDPNPDDPLVPEIA-HMYKTDKN 162
Score = 52.0 bits (119), Expect = 2e-07
Identities = 20/42 (47%), Positives = 31/42 (73%)
Frame = +2
Query: 128 LGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
L ++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP
Sbjct: 29 LEMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 70
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 138 bits (335), Expect = 2e-33
Identities = 64/91 (70%), Positives = 73/91 (80%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y GGVF + IHF P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKV
Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYRIGKS 531
LLS CSLLTD NP DPLV IA H+Y+ K+
Sbjct: 103 LLSICSLLTDPNPDDPLVPEIA-HMYKTDKN 132
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 138 bits (334), Expect = 2e-33
Identities = 64/91 (70%), Positives = 73/91 (80%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y GGVF + IHF P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKV
Sbjct: 43 SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYRIGKS 531
LLS CSLLTD NP DPLV IA H+Y+ K+
Sbjct: 103 LLSICSLLTDPNPDDPLVPEIA-HMYKTDKN 132
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 138 bits (334), Expect = 2e-33
Identities = 64/91 (70%), Positives = 73/91 (80%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y GGVF + IHF P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKV
Sbjct: 43 SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYRIGKS 531
LLS CSLLTD NP DPLV IA H+Y+ K+
Sbjct: 103 LLSICSLLTDPNPDDPLVPEIA-HMYKTDKN 132
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 137 bits (332), Expect = 4e-33
Identities = 63/87 (72%), Positives = 71/87 (81%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S + GGVF + IHF P+YPFKPPKV FRT++YH NINS G ICLDILK+ WSPALT+SKV
Sbjct: 43 SPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKV 102
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYR 519
LLS CSLLTD NP DPLV IA HIY+
Sbjct: 103 LLSICSLLTDPNPDDPLVPEIA-HIYK 128
Score = 57.2 bits (132), Expect = 7e-09
Identities = 21/39 (53%), Positives = 32/39 (82%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
++KRI KEL ++ DPP +CSAGP GD++++W +TI+GP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGP 40
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 137 bits (332), Expect = 4e-33
Identities = 63/87 (72%), Positives = 71/87 (81%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S + GGVF + IHF P+YPFKPPKV FRT++YH NINS G ICLDILK+ WSPALT+SKV
Sbjct: 43 SPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKV 102
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYR 519
LLS CSLLTD NP DPLV IA HIY+
Sbjct: 103 LLSICSLLTDPNPDDPLVPEIA-HIYK 128
Score = 57.2 bits (132), Expect = 7e-09
Identities = 21/39 (53%), Positives = 32/39 (82%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
++KRI KEL ++ DPP +CSAGP GD++++W +TI+GP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGP 40
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 137 bits (332), Expect = 4e-33
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y GGVF + IHF P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKV
Sbjct: 44 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 103
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYRIGKS 531
LLS CSLLTD NP DPLV IA H+Y+ ++
Sbjct: 104 LLSICSLLTDPNPDDPLVPEIA-HMYKTDRA 133
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/40 (45%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNC-SAGPKGDNLYEWVSTILGP 253
++KRI KEL ++ DPP +C AGP ++++ W +TI+GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGP 41
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 137 bits (332), Expect = 4e-33
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y GGVF + IHF P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKV
Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYRIGKS 531
LLS CSLLTD NP DPLV IA H+Y+ ++
Sbjct: 103 LLSICSLLTDPNPDDPLVPEIA-HMYKTDRA 132
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 137 bits (332), Expect = 4e-33
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y GGVF + IHF P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKV
Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYRIGKS 531
LLS CSLLTD NP DPLV IA H+Y+ ++
Sbjct: 103 LLSICSLLTDPNPDDPLVPEIA-HMYKTDRA 132
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 137 bits (331), Expect = 5e-33
Identities = 62/91 (68%), Positives = 73/91 (80%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y GGVF + IHF P+YPFKPPKV FRT+++H N+NS G ICLDILK+ WSPALTISKV
Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKV 102
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYRIGKS 531
LLS CSLLTD NP DPLV IA H+Y+ ++
Sbjct: 103 LLSICSLLTDPNPDDPLVPEIA-HMYKTDRA 132
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 130 bits (315), Expect = 4e-31
Identities = 61/91 (67%), Positives = 72/91 (79%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y GGVF + I FS +YPFKPPKV F+T++YH NI+S+G ICLDILK+ WSPA T SKV
Sbjct: 44 SPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKV 103
Query: 439 LLSRCSLLTDCNPADPLVGSIATHIYRIGKS 531
LLS CSLLTD NP DPLV IA H+Y++ KS
Sbjct: 104 LLSICSLLTDPNPNDPLVPEIA-HLYKVDKS 133
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/40 (45%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKG-DNLYEWVSTILGP 253
++KRI +EL ++ PP NCSAGP ++++ W +TI+GP
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGP 41
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 108 bits (259), Expect = 3e-24
Identities = 50/82 (60%), Positives = 59/82 (71%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISK 435
G+ YEGG+F L I F +YPFKPPK TF+T IYH NIN +G IC++ILKD W+PAL + K
Sbjct: 48 GTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEK 107
Query: 436 VLLSRCSLLTDCNPADPLVGSI 501
VLLS LL NP DPLV I
Sbjct: 108 VLLSILLLLEKPNPDDPLVPEI 129
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 105 bits (251), Expect = 3e-23
Identities = 45/62 (72%), Positives = 51/62 (82%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
S Y GGVF + IHF P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKV
Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102
Query: 439 LL 444
L
Sbjct: 103 TL 104
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 104 bits (249), Expect = 4e-23
Identities = 45/84 (53%), Positives = 63/84 (75%)
Frame = +1
Query: 253 TGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTIS 432
+G+ YEGG+FFLDI F +YPFKPPK+ F+TRIYHCN+++ G + ++IL+D+WSPALTI+
Sbjct: 76 SGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTIT 135
Query: 433 KVLLSRCSLLTDCNPADPLVGSIA 504
KVL + S+ P P + IA
Sbjct: 136 KVLQAIRSIFLKPEPYSPALPVIA 159
Score = 75.8 bits (178), Expect = 2e-14
Identities = 28/43 (65%), Positives = 38/43 (88%)
Frame = +2
Query: 125 ALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
++ S KRIQ+E+AE+ +DPPP+CSAGPKGDNLY W++TI+GP
Sbjct: 33 SVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGP 75
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 100 bits (240), Expect = 5e-22
Identities = 51/86 (59%), Positives = 58/86 (67%)
Frame = +1
Query: 253 TGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTIS 432
T S YEGGVF L++ EYP PKV F T+IYH NI+ G ICLDILKD WSPAL I
Sbjct: 45 TQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIR 104
Query: 433 KVLLSRCSLLTDCNPADPLVGSIATH 510
VLLS +LL+ NP DPL +IA H
Sbjct: 105 TVLLSIQALLSAPNPDDPLSENIAKH 130
Score = 31.5 bits (68), Expect = 0.38
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
+RI KE + +P P SA P DN+ + ILGP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGP 44
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 100 bits (240), Expect = 5e-22
Identities = 51/86 (59%), Positives = 58/86 (67%)
Frame = +1
Query: 253 TGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTIS 432
T S YEGGVF L++ EYP PKV F T+IYH NI+ G ICLDILKD WSPAL I
Sbjct: 45 TQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIR 104
Query: 433 KVLLSRCSLLTDCNPADPLVGSIATH 510
VLLS +LL+ NP DPL +IA H
Sbjct: 105 TVLLSIQALLSAPNPDDPLSENIAKH 130
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
+RI KE + +P P SA P +N+ + ILGP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGP 44
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 100 bits (240), Expect = 5e-22
Identities = 51/86 (59%), Positives = 58/86 (67%)
Frame = +1
Query: 253 TGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTIS 432
T S YEGGVF L++ EYP PKV F T+IYH NI+ G ICLDILKD WSPAL I
Sbjct: 12 TQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIR 71
Query: 433 KVLLSRCSLLTDCNPADPLVGSIATH 510
VLLS +LL+ NP DPL +IA H
Sbjct: 72 TVLLSIQALLSAPNPDDPLSENIAKH 97
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 95.1 bits (226), Expect = 3e-20
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISK 435
G YE GVF + +H P+YP++PPK+TF+T+I+H NI+ G I +DIL WS ALTI+
Sbjct: 71 GCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDILGSRWSSALTINL 130
Query: 436 VLLSRCSLLTDCNPADP-LVGSIATHIYR 519
VLLS CS+L+ NP +P LV + A +Y+
Sbjct: 131 VLLSICSILS--NPVEPLLVSNHAARLYQ 157
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 93.9 bits (223), Expect = 6e-20
Identities = 44/82 (53%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +1
Query: 244 PWATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQ-GVICLDILKDNWSPA 420
P G+ YEGG F +DI YPF+PPK+ F T+++H NI+SQ G ICLDILKD WSPA
Sbjct: 40 PGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPA 99
Query: 421 LTISKVLLSRCSLLTDCNPADP 486
LT+ L+S +LL+ P DP
Sbjct: 100 LTLKTALVSIQALLSAPEPKDP 121
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 83.4 bits (197), Expect = 9e-17
Identities = 40/64 (62%), Positives = 44/64 (68%)
Frame = +1
Query: 253 TGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTIS 432
T S YEGGVF L++ EYP PKV F T+IYH NI+ G ICLDILKD WSPAL I
Sbjct: 45 TQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIR 104
Query: 433 KVLL 444
VLL
Sbjct: 105 TVLL 108
Score = 31.5 bits (68), Expect = 0.38
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
+RI KE + +P P SA P DN+ + ILGP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGP 44
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 81.8 bits (193), Expect = 3e-16
Identities = 37/74 (50%), Positives = 50/74 (67%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLL 444
++GG F L +HF+ +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ VL
Sbjct: 48 WDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLT 107
Query: 445 SRCSLLTDCNPADP 486
S SLL D NP P
Sbjct: 108 SIQSLLCDPNPDSP 121
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPQ 256
KR+ + + DPP S P+ +N+ W + I GP+
Sbjct: 7 KRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPE 44
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 81.8 bits (193), Expect = 3e-16
Identities = 40/88 (45%), Positives = 54/88 (61%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLL 444
++GG F L + FS +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L
Sbjct: 48 WDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILT 107
Query: 445 SRCSLLTDCNPADPLVGSIATHIYRIGK 528
S SLL D NP P S A +Y K
Sbjct: 108 SIQSLLCDPNPNSP-ANSEAARMYSESK 134
Score = 33.9 bits (74), Expect = 0.071
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
KR+ ++ + DPP S P+ +N+ W + I GP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGP 43
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 81.8 bits (193), Expect = 3e-16
Identities = 40/88 (45%), Positives = 54/88 (61%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLL 444
++GG F L + FS +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L
Sbjct: 48 WDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILT 107
Query: 445 SRCSLLTDCNPADPLVGSIATHIYRIGK 528
S SLL D NP P S A +Y K
Sbjct: 108 SIQSLLCDPNPNSP-ANSEAARMYSESK 134
Score = 33.9 bits (74), Expect = 0.071
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
KR+ ++ + DPP S P+ +N+ W + I GP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGP 43
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 80.6 bits (190), Expect = 6e-16
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLL 444
++GG F L + FS +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L
Sbjct: 48 WDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILT 107
Query: 445 SRCSLLTDCNPADP 486
S SLL D NP P
Sbjct: 108 SIQSLLCDPNPNSP 121
Score = 33.9 bits (74), Expect = 0.071
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
KR+ ++ + DPP S P+ +N+ W + I GP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGP 43
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 80.6 bits (190), Expect = 6e-16
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
+V+EG + L + FS +YPFKPPKV F T +H N++ G ICLDIL+D WS A + +
Sbjct: 77 TVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTI 136
Query: 439 LLSRCSLLTDCNPADPL 489
LLS SLL + N + PL
Sbjct: 137 LLSIQSLLGEPNISSPL 153
Score = 33.9 bits (74), Expect = 0.071
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILG 250
KR+Q EL + + P SA P+ DN++ W TI G
Sbjct: 38 KRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITG 73
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 79.4 bits (187), Expect = 1e-15
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +1
Query: 244 PWATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDN--WSP 417
P G+ +EGG F L +HFS +YP KPPK F +H N+ G +CL IL ++ W P
Sbjct: 47 PGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRP 106
Query: 418 ALTISKVLLSRCSLLTDCNPADP 486
A+T+ ++L+ LL NPADP
Sbjct: 107 AITVKQILVGIQDLLDTPNPADP 129
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 79.4 bits (187), Expect = 1e-15
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL----KDNWSPALT 426
+VY G+F L I YPF+PP V+F T IYH NI++ G ICLDIL K W P+L
Sbjct: 57 TVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLN 116
Query: 427 ISKVLLSRCSLLTDCNPADPLVGSIATHIYRIGKST 534
IS VL S LL++ NP D L+ ++ Y+ + T
Sbjct: 117 ISTVLTSMRLLLSEPNPDDGLMCEVSRE-YKYNRQT 151
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 77.0 bits (181), Expect = 8e-15
Identities = 37/77 (48%), Positives = 50/77 (64%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKV 438
+V+EG + L + FS +YPFK PKV F T +H N++ G ICLDIL+D WS A + +
Sbjct: 78 TVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTI 137
Query: 439 LLSRCSLLTDCNPADPL 489
LLS SLL + N + PL
Sbjct: 138 LLSIQSLLGEPNISSPL 154
Score = 34.7 bits (76), Expect = 0.040
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 143 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILG 250
KR+Q EL + + P SA P+ DN++ W TI G
Sbjct: 39 KRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITG 74
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 72.1 bits (169), Expect = 2e-13
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNIN-SQGVICLDILKDNWSPALTISKVL 441
YEGGVF L YP +PP+V F T+I+H N++ G ICLDILK+ WSPA T+ V
Sbjct: 49 YEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVC 108
Query: 442 LSRCSLLTDCNPADPL 489
+ +L+ P PL
Sbjct: 109 RAIIALMAHPEPDSPL 124
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 71.7 bits (168), Expect = 3e-13
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +1
Query: 253 TGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNIN-SQGVICLDILKDNWSPALTI 429
T S+Y+GGV+ + + YP+K P V F +IYH N++ S G +CLD++ WSP +
Sbjct: 40 TDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDL 99
Query: 430 SKVLLSRC-SLLTDCNPADPLVGSIATHIYR 519
V S LL NP+DP G A+ + R
Sbjct: 100 INVFESFLPQLLLYPNPSDPFNGEAASLLMR 130
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 70.9 bits (166), Expect = 5e-13
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINS-QGVICLDILKDNWSPALTISK 435
S+YEGGV+ + + YP+K P V F T+IYH N++ G +CLD++ WSP +
Sbjct: 42 SIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVN 101
Query: 436 VLLSRC-SLLTDCNPADPLVGSIATHIYR 519
V + LL NP+DPL G A + R
Sbjct: 102 VFETFLPQLLLYPNPSDPLNGEAAALMMR 130
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 68.9 bits (161), Expect = 2e-12
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINS-QGVICLDILKDNWSPALTISK 435
S+Y+GGV+ + + YP+K P V F T+IYH N++ G +CLD++ WSP +
Sbjct: 42 SLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVN 101
Query: 436 VLLSRC-SLLTDCNPADPLVGSIATHIYR 519
V + LL NP+DPL G A + R
Sbjct: 102 VFETFLPQLLLYPNPSDPLNGEAAALMMR 130
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 67.7 bits (158), Expect = 5e-12
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLL 444
Y G F S YP + PKV +T++YH NI+ +G +CL+IL+++W P L I+ V+
Sbjct: 74 YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 133
Query: 445 SRCSLLTDCNPADPL 489
L T+ N DPL
Sbjct: 134 GLFHLFTEPNYEDPL 148
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 65.7 bits (153), Expect = 2e-11
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISK 435
G+ YE G+F + + S ++P PPK F T+I+H N+ S G IC++ LK +W+P+L +
Sbjct: 51 GTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRH 110
Query: 436 VL-LSRCSLL 462
VL + RC L+
Sbjct: 111 VLSVVRCLLI 120
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 62.9 bits (146), Expect = 1e-10
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +1
Query: 250 ATGSVYEGGVFFLDIHFSPEYPFKPPKVTF-RTRIYHCNINSQGVICLDILKDNWSPALT 426
A G++Y + L + F YP + P+V F H +I S G ICLDIL D+WSPA+T
Sbjct: 53 APGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMT 112
Query: 427 ISKVLLSRCSLLT 465
+S + +S S+L+
Sbjct: 113 VSSICISILSMLS 125
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 104 PNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILG 250
P+ K + T+ R+QKEL E ++PP DNL W+ ++G
Sbjct: 7 PSRKTLSKIATN--RLQKELVEWQMNPPTGFK-HKVTDNLQRWIIEVIG 52
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +1
Query: 250 ATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRI-YHCNINSQGVICLDILKDNWSPALT 426
A G++Y + L + F YP + P+V F H +I S G ICLDIL D+WSPA+T
Sbjct: 53 APGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMT 112
Query: 427 ISKVLLSRCSLLT 465
+S V +S S+L+
Sbjct: 113 VSSVCISILSMLS 125
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 89 TKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILG-PQAQC 265
T + P+ K + + R+QKEL+E ++PP DNL +WV + G P
Sbjct: 2 TSSSSPSRKALSKI--ACNRLQKELSEWQVNPPTGFKHRVT-DNLQKWVIEVTGAPGTLY 58
Query: 266 MKEEYS 283
E Y+
Sbjct: 59 ANETYN 64
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 62.5 bits (145), Expect = 2e-10
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 250 ATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRI-YHCNINSQGVICLDILKDNWSPALT 426
A G++Y + L + F YP + P+V F + H +I S G ICLDIL D+WSPA+T
Sbjct: 53 APGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMT 112
Query: 427 ISKVLLSRCSLLTDCNPA 480
++ V +S S+L+ +PA
Sbjct: 113 VNSVCISILSMLSS-SPA 129
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 89 TKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILG 250
T + P+ K + + R+QKEL+E L+PP DNL +W + G
Sbjct: 2 TSSSAPSRKALSKI--ACNRLQKELSEWQLNPPTG-FRHKVTDNLQKWTIDVTG 52
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRI-YHCNINSQGVICLDILKDNWSPALTIS 432
G++Y + L + F YP + P+V F+ H +I S G ICLD+L D+WSPA+ +S
Sbjct: 55 GTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLS 114
Query: 433 KVLLSRCSLLT 465
+ LS S+L+
Sbjct: 115 SICLSILSMLS 125
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 58.0 bits (134), Expect = 4e-09
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALT 426
G+ + GG ++ I F PEYP+KPP +T T + +Q ICL D ++W+P +
Sbjct: 46 GTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWS 103
Query: 427 ISKVLLSRCSLLTDCNPADPLVGSIATHIYRIGKSTTA 540
+S +L S + D +P V + R+ KS+ A
Sbjct: 104 VSSILTGLLSFMMDTSPTTGSVNTTVIEKQRLAKSSLA 141
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 56.8 bits (131), Expect = 9e-09
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALT 426
G+ + GG ++ I F PEYP+KPP +T T + +Q ICL D ++W+P +
Sbjct: 46 GTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWS 103
Query: 427 ISKVLLSRCSLLTDCNPADPLVGSIATHIYRIGKSTTA 540
+S +L S + D +P V + R+ KS+ A
Sbjct: 104 VSSILTGLLSFMMDNSPTTGSVNTSVAEKQRLAKSSLA 141
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 56.8 bits (131), Expect = 9e-09
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL------------- 399
++YEGG F + F YP PP VTF + ++H N+ S G +C+ IL
Sbjct: 48 TLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELA 107
Query: 400 KDNWSPALTISKVLLSRCSLLTDCNPADP 486
+ W+P T+ ++LS S+L+ N P
Sbjct: 108 SERWTPVHTVESIVLSIISMLSGPNDESP 136
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 54.4 bits (125), Expect = 5e-08
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL------------- 399
++YEGG F+ + F YP PP V F + I+H N+ G +C+ IL
Sbjct: 47 TLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELA 106
Query: 400 KDNWSPALTISKVLLSRCSLLTDCNPADP 486
+ W+P T+ ++LS S+L+ N P
Sbjct: 107 SERWTPVHTVESIMLSIISMLSGPNDESP 135
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 149 IQKELAEITLDPPPNCSAGPKGD-NLYEWVSTILGP 253
+QK+L ++ P SAG + N++EW TI+GP
Sbjct: 9 LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGP 44
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL------------- 399
++YEGG F + F YP PP V F + ++H N+ S G +C+ IL
Sbjct: 79 TLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELA 138
Query: 400 KDNWSPALTISKVLLSRCSLLTDCNPADP 486
+ W+P T+ ++LS S+L+ N P
Sbjct: 139 SERWTPVHTVESIMLSIISMLSGPNDESP 167
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 250 ATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNIN--SQGVICLDILKDNWS 414
A G+ Y G+FF DI P+YP +PP V + + N N G +CL +L + WS
Sbjct: 701 APGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLL-NTWS 756
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 43.6 bits (98), Expect = 9e-05
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Frame = +1
Query: 250 ATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNIN--SQGVICLDIL-------K 402
A G+ Y+ G+FF D H +YP PP + + + N N +G +CL +L
Sbjct: 889 AFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGN 948
Query: 403 DNWSP-ALTISKVLLSRCSLLTDCNP 477
+ W P + +I +VL+S L+ + P
Sbjct: 949 EVWDPKSSSILQVLVSLQGLVLNSKP 974
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 41.1 bits (92), Expect = 5e-04
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Frame = +1
Query: 250 ATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNIN--SQGVICLDIL-------K 402
A G+ Y G+FF DI F YP PPKV + + N N G +CL ++ +
Sbjct: 644 AEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLISTWTGKKR 703
Query: 403 DNWSP-ALTISKVLLSRCSLLTDCNP 477
+ W P T+ ++L+S +L+ + P
Sbjct: 704 EKWLPKESTMLQLLVSIQALILNEKP 729
Score = 40.3 bits (90), Expect = 8e-04
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Frame = +1
Query: 250 ATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNIN--SQGVICLDIL-------K 402
A G+ Y G+FF DI F YP PP V + + N N + G +CL +L +
Sbjct: 310 AEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAR 369
Query: 403 DNWSP-ALTISKVLLSRCSLLTDCNP 477
+ W P T+ ++L+S +L+ + P
Sbjct: 370 EKWLPNESTMLQLLVSIQALILNEKP 395
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 250 ATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNIN 369
A G+ Y G+FF DI F YP PP V + + N N
Sbjct: 956 AEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPN 995
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 40.7 bits (91), Expect = 6e-04
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Frame = +1
Query: 250 ATGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNIN--SQGVICLDIL-------K 402
A G+ Y G+FF DI F YP PP V + + N N + G +CL +L +
Sbjct: 371 AQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQR 430
Query: 403 DNWSP-ALTISKVLLSRCSLLTDCNP 477
+ W P T+ +VL+S L+ + P
Sbjct: 431 EKWIPNTSTMLQVLVSIQGLILNQKP 456
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQ-GVI--CLDILKDNWSPALTI 429
+ YEG +F L + EYP PP V F+TRI +N + GV+ L + NW T+
Sbjct: 57 TAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTM 116
Query: 430 SKVLL 444
+L+
Sbjct: 117 EDILV 121
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 265 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILK---DNWSPALTISK 435
+EGG++ I +YPFKPP T N++ ICL I ++W P+ ++
Sbjct: 55 FEGGIYHGRIQLPADYPFKPPSFMLLTPNGRFETNTK--ICLSISNYHPEHWQPSWSVRT 112
Query: 436 VLLS 447
L++
Sbjct: 113 ALVA 116
Score = 31.1 bits (67), Expect = 0.50
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 137 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGP 253
+ KRI +E+ E+ +P + + P +N++EW I GP
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGP 50
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 35.9 bits (79), Expect = 0.017
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQ-GVICLD--ILKDNWSPALTI 429
+ YEG +F L + +YP PP V F++RI +N + GV+ + NW T+
Sbjct: 57 TAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTM 116
Query: 430 SKVLLS-RCSLLTDCNP--ADPLVGS 498
+L+ + +++ N A PL G+
Sbjct: 117 EDLLIQLKKEMMSSQNRKLAQPLEGN 142
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 35.1 bits (77), Expect = 0.031
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQ-GVICLDI--LKDNWSPALTI 429
+V+EG ++ L + +YP KPP V F +R+ +N + GV+ L NW T+
Sbjct: 60 TVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTM 119
Query: 430 SKVLL 444
+L+
Sbjct: 120 EDILV 124
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 35.1 bits (77), Expect = 0.031
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQ-GVICLDI--LKDNWSPALTI 429
+V+EG ++ L + +YP KPP V F +R+ +N + GV+ L NW T+
Sbjct: 59 TVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTM 118
Query: 430 SKVLL 444
+L+
Sbjct: 119 EDILV 123
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 33.5 bits (73), Expect = 0.093
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRI-YHCNINSQGVI---CLDILKDNWSPALT 426
+V+EG ++ L + +YP KPP V F +RI C + GV+ +L NW T
Sbjct: 59 TVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLA-NWQRQYT 117
Query: 427 ISKVL 441
+ +L
Sbjct: 118 MEDIL 122
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 33.5 bits (73), Expect = 0.093
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 259 SVYEGGVFFLDIHFSPEYPFKPPKVTFRTRI-YHCNINSQGVI---CLDILKDNWSPALT 426
+V+EG ++ L + +YP KPP V F +RI C + GV+ +L NW T
Sbjct: 58 TVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLA-NWQRQYT 116
Query: 427 ISKVL 441
+ +L
Sbjct: 117 MEDIL 121
>At1g29400.2 68414.m03597 RNA recognition motif (RRM)-containing
protein similar to GI:6650523 from [Arabidopsis
thaliana]
Length = 800
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 249 PRMVDTHSYKLSPFGPALQFGGGSNVISANSF 154
P+M + ++ LSP GP + GGG +S + F
Sbjct: 436 PKMDNKYTGNLSPSGPLISNGGGIETLSGSEF 467
>At1g29400.1 68414.m03596 RNA recognition motif (RRM)-containing
protein similar to GI:6650523 from [Arabidopsis
thaliana]
Length = 800
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 249 PRMVDTHSYKLSPFGPALQFGGGSNVISANSF 154
P+M + ++ LSP GP + GGG +S + F
Sbjct: 436 PKMDNKYTGNLSPSGPLISNGGGIETLSGSEF 467
>At5g24470.1 68418.m02884 pseudo-response regulator 5 (APRR5)
identical to pseudo-response regulator 5 GI:10281006
from [Arabidopsis thaliana]
Length = 667
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 235 VYHPWATGSVYEGGVFFLDIHFSPEYPFKPPKVTF 339
V HP + +V FFLDI FSP Y ++ KV F
Sbjct: 30 VRHPLSIITVKTFARFFLDIFFSPHY-YRKNKVLF 63
>At5g20770.1 68418.m02468 hypothetical protein
Length = 231
Score = 28.7 bits (61), Expect = 2.7
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 345 CSECHLWWLKR 313
C+EC+LWWL R
Sbjct: 215 CNECYLWWLSR 225
>At3g14630.1 68416.m01852 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 508
Score = 28.7 bits (61), Expect = 2.7
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +3
Query: 18 VWCIWFIRQWNWIEAEVQQT 77
+WCIW I +W W++ ++ ++
Sbjct: 14 LWCIWRILEWVWLKPKMLES 33
>At5g42470.1 68418.m05170 expressed protein low similarity to BRE
alpha b isoform [Homo sapiens] GI:16326573
Length = 382
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +1
Query: 280 FFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSRCSL 459
F + FS ++P + P + ++ H N +S V + + WSP + ++ C
Sbjct: 305 FMVHFFFSTQFPKQQPTLMLQS-CQHLNQSSVPVKSNLLTEYPWSPRWEVGRMAERLCDF 363
Query: 460 LTD 468
LTD
Sbjct: 364 LTD 366
>At1g48120.1 68414.m05370 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 1338
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 38 QAVELDRGRSATDGKPDTKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNC 196
+ E+ + S T GKP++ +A+GT AK I L+P P C
Sbjct: 1069 ETAEISKDLSDTVGKPESCSR--TRGTYEAIGTDAKLKSNTPEAINLEPQPGC 1119
>At5g55550.3 68418.m06922 RNA recognition motif (RRM)-containing
protein similar to DAZ associated protein 1 [Homo
sapiens] GI:8671754; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 460
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 249 PRMVDTHSYKLSPFGPALQFGGGSNVISANSF 154
P+ + S SP + +GGGSN + ANS+
Sbjct: 187 PKEISPVSNIRSPLASGVNYGGGSNRMPANSY 218
>At5g55550.2 68418.m06921 RNA recognition motif (RRM)-containing
protein similar to DAZ associated protein 1 [Homo
sapiens] GI:8671754; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 460
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 249 PRMVDTHSYKLSPFGPALQFGGGSNVISANSF 154
P+ + S SP + +GGGSN + ANS+
Sbjct: 187 PKEISPVSNIRSPLASGVNYGGGSNRMPANSY 218
>At5g55550.1 68418.m06920 RNA recognition motif (RRM)-containing
protein similar to DAZ associated protein 1 [Homo
sapiens] GI:8671754; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 448
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 249 PRMVDTHSYKLSPFGPALQFGGGSNVISANSF 154
P+ + S SP + +GGGSN + ANS+
Sbjct: 187 PKEISPVSNIRSPLASGVNYGGGSNRMPANSY 218
>At4g17620.1 68417.m02636 glycine-rich protein
Length = 544
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 238 YHPWATGSVYEGGVFFLDIHFSPEYP 315
+ PW G G +LD+H PE P
Sbjct: 311 HEPWEMGVHKRNGTIYLDVHKLPERP 336
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 86 DTKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPKG 214
DT EN+ N ++KA + QK LAE T + +AG KG
Sbjct: 732 DTFENRVNQVLNKARDDAGSSAQKSLAE-TNNLKAMVTAGSKG 773
>At1g73650.3 68414.m08526 expressed protein
Length = 302
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -3
Query: 289 LGRILLLHTLSLWPKDGRHP-----FIQIISFWSCTAVWWW 182
LG LL+ L W +D R +++I FW+ AVW W
Sbjct: 77 LGIFLLMRILQ-WGEDRRFDEQRGNIVRLIIFWTLQAVWVW 116
>At1g73650.2 68414.m08528 expressed protein
Length = 291
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -3
Query: 289 LGRILLLHTLSLWPKDGRHP-----FIQIISFWSCTAVWWW 182
LG LL+ L W +D R +++I FW+ AVW W
Sbjct: 77 LGIFLLMRILQ-WGEDRRFDEQRGNIVRLIIFWTLQAVWVW 116
>At1g73650.1 68414.m08527 expressed protein
Length = 290
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -3
Query: 289 LGRILLLHTLSLWPKDGRHP-----FIQIISFWSCTAVWWW 182
LG LL+ L W +D R +++I FW+ AVW W
Sbjct: 77 LGIFLLMRILQ-WGEDRRFDEQRGNIVRLIIFWTLQAVWVW 116
>At1g50060.1 68414.m05617 pathogenesis-related protein, putative
similar to prb-1b [Nicotiana tabacum] GI:19970; contains
Pfam profile PF00188: SCP-like extracellular protein
Length = 161
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -3
Query: 298 NECLGRILLLH-TLSLWPKDGRHPFIQIISFWSCTAVWWWVQCNF 167
N C G LH T +W + ++ CT WW+V CN+
Sbjct: 109 NNCTGGKQCLHYTQVVWRDSVKIGCARV----QCTNTWWFVSCNY 149
>At3g48780.1 68416.m05327 serine C-palmitoyltransferase, putative
similar to serine palmitoyltransferase from Solanum
tuberosum [GI:4995890], Homo sapiens [SP|O15270], Mus
musculus [SP|P97363]
Length = 489
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 51 WIEA--EVQQTANQTRKRTNQTIKCQRLSAHRPRGF 152
WI+ V N+T KRT +T +C L ++ GF
Sbjct: 78 WIDVVERVSDDNNKTLKRTTKTSRCLNLGSYNYLGF 113
>At1g61870.1 68414.m06981 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 408
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +1
Query: 319 KPPKVTFRTRIYH-C---NINSQGVICLDILKDNWSPALTISKVLLSRCSLLTDCNPADP 486
KP + T IY+ C + + +C + ++ NW P+ +I K L++ + + A
Sbjct: 324 KPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKE 383
Query: 487 LVGSI 501
L+G +
Sbjct: 384 LIGQV 388
>At1g11310.1 68414.m01299 seven transmembrane MLO family protein /
MLO-like protein 2 (MLO2) idenctical to membrane protein
Mlo2 [Arabidopsis thaliana] gi|14091574|gb|AAK53795;
similar to Mlo [Hordeum vulgare subsp. vulgare]
gi|1877221|emb|CAB06083 SWISS-PROT:P93766
Length = 573
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 217 ISFWSCTAVWWWVQCNFCQF 158
++FWS T V W+ C F QF
Sbjct: 226 LNFWSKTRVTLWIVCFFRQF 245
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,544,149
Number of Sequences: 28952
Number of extensions: 312639
Number of successful extensions: 1006
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1013649368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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