Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00186
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 124 6e-29
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 124 6e-29
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 120 9e-28
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 120 9e-28
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 120 9e-28
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 119 2e-27
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 116 2e-26
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 116 2e-26
Z81506-10|CAB04123.2| 270|Caenorhabditis elegans Hypothetical p... 29 2.2
AL023836-2|CAC42371.1| 270|Caenorhabditis elegans Hypothetical ... 29 2.2
AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81523-10|CAC70089.1| 171|Caenorhabditis elegans Hypothetical p... 28 5.1
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 124 bits (299), Expect = 6e-29
Identities = 53/87 (60%), Positives = 69/87 (79%)
Frame = +2
Query: 248 QGGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNL 427
+ GLCRRC+VQV+YAIGVA+PLS+ VF +GTS +++ LL+IV NFDLRPGKI+K L+L
Sbjct: 244 KAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALSEEDLLTIVNDNFDLRPGKIIKNLDL 303
Query: 428 RAPIYQRTSTYGHFGRAGFPWESPKPL 508
+ PIY+ T+ GHFG FPWE P+ L
Sbjct: 304 KRPIYEPTAENGHFGHNNFPWEQPRNL 330
Score = 120 bits (290), Expect = 7e-28
Identities = 58/84 (69%), Positives = 63/84 (75%)
Frame = +3
Query: 3 KVIKEVIPAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXX 182
KVIK VIPA +D++T+ H+NPCG FIIGGP DAGLTGRKIIVDTY
Sbjct: 162 KVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSG 221
Query: 183 KDFTKVDRSAAYAARWVAKSLVKA 254
KD TKVDRSAAYAARWVAKSLVKA
Sbjct: 222 KDPTKVDRSAAYAARWVAKSLVKA 245
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 124 bits (299), Expect = 6e-29
Identities = 53/87 (60%), Positives = 69/87 (79%)
Frame = +2
Query: 248 QGGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNL 427
+ GLCRRC+VQV+YAIGVA+PLS+ VF +GTS +++ LL+IV NFDLRPGKI+K L+L
Sbjct: 295 KAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALSEEDLLTIVNDNFDLRPGKIIKNLDL 354
Query: 428 RAPIYQRTSTYGHFGRAGFPWESPKPL 508
+ PIY+ T+ GHFG FPWE P+ L
Sbjct: 355 KRPIYEPTAENGHFGHNNFPWEQPRNL 381
Score = 120 bits (290), Expect = 7e-28
Identities = 58/84 (69%), Positives = 63/84 (75%)
Frame = +3
Query: 3 KVIKEVIPAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXX 182
KVIK VIPA +D++T+ H+NPCG FIIGGP DAGLTGRKIIVDTY
Sbjct: 213 KVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSG 272
Query: 183 KDFTKVDRSAAYAARWVAKSLVKA 254
KD TKVDRSAAYAARWVAKSLVKA
Sbjct: 273 KDPTKVDRSAAYAARWVAKSLVKA 296
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 120 bits (289), Expect = 9e-28
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +2
Query: 248 QGGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNL 427
+ GLCRRC+VQV+YAIGVA+PLS+ VF +GTS + +LL IV NFDLRPG I+K+L+L
Sbjct: 295 KSGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDL 354
Query: 428 RAPIYQRTSTYGHFGRAGFPWESPKPL 508
+ PIY+ T+ GHFG FPWE P+ L
Sbjct: 355 KKPIYEPTAENGHFGHNEFPWEQPRHL 381
Score = 119 bits (287), Expect = 2e-27
Identities = 57/84 (67%), Positives = 63/84 (75%)
Frame = +3
Query: 3 KVIKEVIPAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXX 182
KVIK VIPA +D++T+ H+NPCG FIIGGP DAGLTGRKIIVDTY
Sbjct: 213 KVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSG 272
Query: 183 KDFTKVDRSAAYAARWVAKSLVKA 254
KD TKVDRSAAYAARWVAKSLVK+
Sbjct: 273 KDPTKVDRSAAYAARWVAKSLVKS 296
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 120 bits (289), Expect = 9e-28
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +2
Query: 248 QGGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNL 427
+ GLCRRC+VQV+YAIGVA+PLS+ VF +GTS + +LL IV NFDLRPG I+K+L+L
Sbjct: 254 KSGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDL 313
Query: 428 RAPIYQRTSTYGHFGRAGFPWESPKPL 508
+ PIY+ T+ GHFG FPWE P+ L
Sbjct: 314 KKPIYEPTAENGHFGHNEFPWEQPRHL 340
Score = 119 bits (287), Expect = 2e-27
Identities = 57/84 (67%), Positives = 63/84 (75%)
Frame = +3
Query: 3 KVIKEVIPAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXX 182
KVIK VIPA +D++T+ H+NPCG FIIGGP DAGLTGRKIIVDTY
Sbjct: 172 KVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSG 231
Query: 183 KDFTKVDRSAAYAARWVAKSLVKA 254
KD TKVDRSAAYAARWVAKSLVK+
Sbjct: 232 KDPTKVDRSAAYAARWVAKSLVKS 255
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 120 bits (289), Expect = 9e-28
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +2
Query: 248 QGGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNL 427
+ GLCRRC+VQV+YAIGVA+PLS+ VF +GTS + +LL IV NFDLRPG I+K+L+L
Sbjct: 236 KSGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDL 295
Query: 428 RAPIYQRTSTYGHFGRAGFPWESPKPL 508
+ PIY+ T+ GHFG FPWE P+ L
Sbjct: 296 KKPIYEPTAENGHFGHNEFPWEQPRHL 322
Score = 119 bits (287), Expect = 2e-27
Identities = 57/84 (67%), Positives = 63/84 (75%)
Frame = +3
Query: 3 KVIKEVIPAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXX 182
KVIK VIPA +D++T+ H+NPCG FIIGGP DAGLTGRKIIVDTY
Sbjct: 154 KVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSG 213
Query: 183 KDFTKVDRSAAYAARWVAKSLVKA 254
KD TKVDRSAAYAARWVAKSLVK+
Sbjct: 214 KDPTKVDRSAAYAARWVAKSLVKS 237
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 119 bits (287), Expect = 2e-27
Identities = 59/86 (68%), Positives = 62/86 (72%)
Frame = +3
Query: 6 VIKEVIPAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXK 185
VIK+VIPA LDE TV HINPCG FI+GGP DAG+TGRKIIVDTY K
Sbjct: 213 VIKKVIPASLLDESTVFHINPCGTFIVGGPMGDAGVTGRKIIVDTYGGWGAHGGGAFSGK 272
Query: 186 DFTKVDRSAAYAARWVAKSLVKAACA 263
D TKVDRSAAYAARWVA SLVKA A
Sbjct: 273 DPTKVDRSAAYAARWVATSLVKAGLA 298
Score = 111 bits (267), Expect = 4e-25
Identities = 46/87 (52%), Positives = 68/87 (78%)
Frame = +2
Query: 248 QGGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNL 427
+ GL +R +VQ++YAIG+A+P+S+ V+ +GTS T ++L IV+ +FDL PGKI+KEL+L
Sbjct: 294 KAGLAKRVLVQLSYAIGIAKPISVLVYAFGTSPLTDEELHQIVEDSFDLTPGKIIKELDL 353
Query: 428 RAPIYQRTSTYGHFGRAGFPWESPKPL 508
+ PIY++T+ GHFG + FPWE PK L
Sbjct: 354 KRPIYEKTAENGHFGHSEFPWEQPKAL 380
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 116 bits (278), Expect = 2e-26
Identities = 56/84 (66%), Positives = 60/84 (71%)
Frame = +3
Query: 3 KVIKEVIPAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXX 182
KVIK VIP +D TV H+NPCG F++GGP DAGLTGRKIIVDTY
Sbjct: 162 KVIKVVIPGNLIDNDTVYHLNPCGSFVVGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSG 221
Query: 183 KDFTKVDRSAAYAARWVAKSLVKA 254
KD TKVDRSAAYAARWVAKSLVKA
Sbjct: 222 KDPTKVDRSAAYAARWVAKSLVKA 245
Score = 114 bits (274), Expect = 6e-26
Identities = 50/87 (57%), Positives = 64/87 (73%)
Frame = +2
Query: 248 QGGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNL 427
+ GLCRRC+VQV+YAIGVA+PLS+ VF +GTS + +LL IV NFDLRPG I+K L+L
Sbjct: 244 KAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDL 303
Query: 428 RAPIYQRTSTYGHFGRAGFPWESPKPL 508
+ IY+ T+ GHFG FPWE + L
Sbjct: 304 KRAIYEPTAENGHFGHNDFPWEQARKL 330
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 116 bits (278), Expect = 2e-26
Identities = 56/84 (66%), Positives = 60/84 (71%)
Frame = +3
Query: 3 KVIKEVIPAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXX 182
KVIK VIP +D TV H+NPCG F++GGP DAGLTGRKIIVDTY
Sbjct: 213 KVIKVVIPGNLIDNDTVYHLNPCGSFVVGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSG 272
Query: 183 KDFTKVDRSAAYAARWVAKSLVKA 254
KD TKVDRSAAYAARWVAKSLVKA
Sbjct: 273 KDPTKVDRSAAYAARWVAKSLVKA 296
Score = 114 bits (274), Expect = 6e-26
Identities = 50/87 (57%), Positives = 64/87 (73%)
Frame = +2
Query: 248 QGGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNL 427
+ GLCRRC+VQV+YAIGVA+PLS+ VF +GTS + +LL IV NFDLRPG I+K L+L
Sbjct: 295 KAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDL 354
Query: 428 RAPIYQRTSTYGHFGRAGFPWESPKPL 508
+ IY+ T+ GHFG FPWE + L
Sbjct: 355 KRAIYEPTAENGHFGHNDFPWEQARKL 381
>Z81506-10|CAB04123.2| 270|Caenorhabditis elegans Hypothetical
protein F16H6.10 protein.
Length = 270
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 257 LCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIV 412
LC + V ++ V LSIT+ + + +KT L +++ DLRP ++
Sbjct: 73 LCSDDLESVLSSMRVLSHLSITISEESSLNKTDVTFLKHLKRILDLRPSSLI 124
>AL023836-2|CAC42371.1| 270|Caenorhabditis elegans Hypothetical
protein F16H6.10 protein.
Length = 270
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 257 LCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIV 412
LC + V ++ V LSIT+ + + +KT L +++ DLRP ++
Sbjct: 73 LCSDDLESVLSSMRVLSHLSITISEESSLNKTDVTFLKHLKRILDLRPSSLI 124
>AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical
protein Y67H2A.1 protein.
Length = 707
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 191 HQGRPLRSIR-RPMGRQVARQGGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHK 349
H+ R +R R M + +GG RC++ A+AIG A+ L + + +Y SH+
Sbjct: 213 HEDRAVREKRFTQMVHDIVTRGG---RCLIP-AFAIGPAQELMLILDEYWESHQ 262
>Z81523-10|CAC70089.1| 171|Caenorhabditis elegans Hypothetical
protein F32H2.10 protein.
Length = 171
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 299 VAEPLSITVFDYGTSH-KTQQQLLSIVQK 382
+++PLS +F+Y SH ++LL I+QK
Sbjct: 26 ISDPLSKQIFEYEQSHTPNDRELLEIIQK 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,602,738
Number of Sequences: 27780
Number of extensions: 334971
Number of successful extensions: 807
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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