Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00184
         (729 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42438-8|AAF99867.2|  368|Caenorhabditis elegans Homolog of yeas...    89   3e-18
AF105010-1|AAD16893.1|  368|Caenorhabditis elegans LAG1Ce-1 prot...    89   3e-18
U40415-6|AAP68933.1|  329|Caenorhabditis elegans Homolog of yeas...    49   4e-06
Z73423-4|CAH60746.1|  307|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z73423-3|CAA97775.2|  327|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z46794-6|CAA86776.1|  416|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>U42438-8|AAF99867.2|  368|Caenorhabditis elegans Homolog of yeast
           longevity geneprotein 1 protein.
          Length = 368

 Score = 89.0 bits (211), Expect = 3e-18
 Identities = 33/72 (45%), Positives = 48/72 (66%)
 Frame = +1

Query: 514 KFCENCWRCSFYLYNFSYGMFILWEKTWLWDIDQCYIGYPHQGVTGDVWWYYMISSAFYW 693
           K  E  WR S+Y + F YG++++   +WL+D+ QC+IGYP   V   +WWYYMI + FY+
Sbjct: 91  KILECFWRFSYYTFAFLYGLYVMKNSSWLYDVKQCWIGYPFHPVPDTIWWYYMIETGFYY 150

Query: 694 SLTISQFWDVKR 729
           SL I   +DV+R
Sbjct: 151 SLLIGSTFDVRR 162



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 145 FWDESVWLPPNTTWEDL 195
           FW E  WLP N TW ++
Sbjct: 7   FWHEPYWLPRNVTWPEV 23


>AF105010-1|AAD16893.1|  368|Caenorhabditis elegans LAG1Ce-1
           protein.
          Length = 368

 Score = 89.0 bits (211), Expect = 3e-18
 Identities = 33/72 (45%), Positives = 48/72 (66%)
 Frame = +1

Query: 514 KFCENCWRCSFYLYNFSYGMFILWEKTWLWDIDQCYIGYPHQGVTGDVWWYYMISSAFYW 693
           K  E  WR S+Y + F YG++++   +WL+D+ QC+IGYP   V   +WWYYMI + FY+
Sbjct: 91  KILECFWRFSYYTFAFLYGLYVMKNSSWLYDVKQCWIGYPFHPVPDTIWWYYMIETGFYY 150

Query: 694 SLTISQFWDVKR 729
           SL I   +DV+R
Sbjct: 151 SLLIGSTFDVRR 162



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 145 FWDESVWLPPNTTWEDL 195
           FW E  WLP N TW ++
Sbjct: 7   FWHEPYWLPRNVTWPEV 23


>U40415-6|AAP68933.1|  329|Caenorhabditis elegans Homolog of yeast
           longevity geneprotein 2 protein.
          Length = 329

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +1

Query: 514 KFCENCWRCSFYLYNFSYGMFILWEKTWLWDIDQCYIGYPHQGVTGDVWWYYMISSAFYW 693
           +  E   R  +Y  +F  G++++  ++ L+DI +C+  +P   +   V WYY I   FY 
Sbjct: 87  RMAECAMRALYYTISFVCGLYLVLHESHLYDITECWRNWPFHPIPNAVAWYYWIQGGFYI 146

Query: 694 SLTIS-QFWDVKR 729
           +L     F D KR
Sbjct: 147 ALVFGILFLDAKR 159


>Z73423-4|CAH60746.1|  307|Caenorhabditis elegans Hypothetical
           protein C03A3.1b protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -2

Query: 446 SPLVRQCTYLFMFQFGRCLICIF*FRIVWCFLRSGIFNTY*FS 318
           S L+ QCT   +  +G  ++ ++    +  F+ SG F ++ FS
Sbjct: 237 SRLLSQCTVFLLNIYGHWILTVYSANHITAFMLSGFFTSFLFS 279


>Z73423-3|CAA97775.2|  327|Caenorhabditis elegans Hypothetical
           protein C03A3.1a protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -2

Query: 446 SPLVRQCTYLFMFQFGRCLICIF*FRIVWCFLRSGIFNTY*FS 318
           S L+ QCT   +  +G  ++ ++    +  F+ SG F ++ FS
Sbjct: 257 SRLLSQCTVFLLNIYGHWILTVYSANHITAFMLSGFFTSFLFS 299


>Z46794-6|CAA86776.1|  416|Caenorhabditis elegans Hypothetical
           protein R06F6.6 protein.
          Length = 416

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 434 EQVDLSERQVERWWRLRRSQDKPSTWSSSA 523
           + + LSE QV+ W++ RR++DK    S +A
Sbjct: 165 QSLKLSENQVKTWFQNRRAKDKRDRKSENA 194


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,718,036
Number of Sequences: 27780
Number of extensions: 434942
Number of successful extensions: 1230
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)