Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00180
         (672 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VL16 Cluster: CG5676-PA; n=7; Endopterygota|Rep: CG56...    63   5e-09
UniRef50_UPI00003C0C03 Cluster: PREDICTED: similar to FUN14 doma...    59   8e-08
UniRef50_Q4PM91 Cluster: FUN14 family protein; n=1; Ixodes scapu...    39   0.13 
UniRef50_A7SUB5 Cluster: Predicted protein; n=1; Nematostella ve...    38   0.17 
UniRef50_Q8IVP5 Cluster: FUN14 domain-containing protein 1; n=33...    38   0.17 
UniRef50_A6R4P1 Cluster: Predicted protein; n=1; Ajellomyces cap...    34   2.7  
UniRef50_Q8RCF6 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_A7SRU5 Cluster: Predicted protein; n=1; Nematostella ve...    33   4.8  
UniRef50_A5TX46 Cluster: Possible bacteriophage tail protein; n=...    33   8.3  
UniRef50_A2DJW1 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  

>UniRef50_Q9VL16 Cluster: CG5676-PA; n=7; Endopterygota|Rep:
           CG5676-PA - Drosophila melanogaster (Fruit fly)
          Length = 156

 Score = 63.3 bits (147), Expect = 5e-09
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
 Frame = +2

Query: 257 LHIASQKGYIDINWDKINKKVDKISDKIEKEATGKSPDWFEKVERFVDRXXXXXXXXXXX 436
           L IA Q+G I INW K++K VDK++DK+E  + G+  +W +K ER+VD            
Sbjct: 56  LEIAHQEGLIKINWSKLDKSVDKLADKVE-ASLGREKNWKDKTERYVDNQLDRAESLLTR 114

Query: 437 XXXXXXXWYNNFTGDDQ-YRATESHSFWQHF 526
                  WY    GD++  +  + H F   F
Sbjct: 115 NGKKVAKWYTKLIGDEEGPKVNDLHIFLASF 145



 Score = 37.9 bits (84), Expect = 0.22
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = +3

Query: 117 ERAIADIGKTSATKQLILGTASGWITGFISM 209
           ++   DIG+ SA  Q+++G +SGW+TG+ +M
Sbjct: 9   KKVFNDIGQRSAYSQMLIGVSSGWVTGYTTM 39


>UniRef50_UPI00003C0C03 Cluster: PREDICTED: similar to FUN14 domain
           containing 1; n=1; Apis mellifera|Rep: PREDICTED:
           similar to FUN14 domain containing 1 - Apis mellifera
          Length = 142

 Score = 59.3 bits (137), Expect = 8e-08
 Identities = 24/43 (55%), Positives = 33/43 (76%)
 Frame = +2

Query: 257 LHIASQKGYIDINWDKINKKVDKISDKIEKEATGKSPDWFEKV 385
           L IA+ +GYI INWDKI KK +KI+DK+E+  TG+ P + +KV
Sbjct: 76  LQIAAHQGYIKINWDKIQKKAEKITDKVEETVTGEGPKFLDKV 118



 Score = 55.6 bits (128), Expect = 1e-06
 Identities = 22/55 (40%), Positives = 38/55 (69%)
 Frame = +3

Query: 45  MAKPKNEDASEEAKKIVDDAKNFIERAIADIGKTSATKQLILGTASGWITGFISM 209
           + K   ++A++E   I   A++ I++ + D+ K S TKQ+I+GT SGW+TGFI++
Sbjct: 5   VTKKNKDNANKEELNISKHAESMIDKILGDVNKKSTTKQIIIGTTSGWLTGFITI 59


>UniRef50_Q4PM91 Cluster: FUN14 family protein; n=1; Ixodes
           scapularis|Rep: FUN14 family protein - Ixodes scapularis
           (Black-legged tick) (Deer tick)
          Length = 141

 Score = 38.7 bits (86), Expect = 0.13
 Identities = 13/45 (28%), Positives = 28/45 (62%)
 Frame = +2

Query: 263 IASQKGYIDINWDKINKKVDKISDKIEKEATGKSPDWFEKVERFV 397
           IA  +GY+ +NW ++NK + +  +++ + A  K P   E+ ++F+
Sbjct: 76  IAQHQGYVKVNWTRLNKDMQQAKNELARRANSKLPRIVEEGQQFI 120


>UniRef50_A7SUB5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 155

 Score = 38.3 bits (85), Expect = 0.17
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +2

Query: 257 LHIASQKGYIDINWDKINKKVDKISDKIEKE 349
           L IA + GYI+INW K+ K  +K+S  +E+E
Sbjct: 79  LQIAHKTGYININWKKVEKDYNKVSRHVERE 109


>UniRef50_Q8IVP5 Cluster: FUN14 domain-containing protein 1; n=33;
           Euteleostomi|Rep: FUN14 domain-containing protein 1 -
           Homo sapiens (Human)
          Length = 155

 Score = 38.3 bits (85), Expect = 0.17
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +2

Query: 257 LHIASQKGYIDINWDKINKKVDKISDKIEKEATGKSPD 370
           L IAS  GY+ I+W ++ K V+K   +I+K A   +P+
Sbjct: 86  LQIASHSGYVQIDWKRVEKDVNKAKRQIKKRANKAAPE 123


>UniRef50_A6R4P1 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 486

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 14/56 (25%), Positives = 31/56 (55%)
 Frame = +2

Query: 218 KSSSCWTWRWSHFLHIASQKGYIDINWDKINKKVDKISDKIEKEATGKSPDWFEKV 385
           K+  C   R     H  +++GY  I+W+ ++K+++K   ++++  T K P ++  V
Sbjct: 310 KAQFCRDHRIKAAKHQWAERGYPKIDWENLHKRIEKHYAELDEILTRKKPSFYRNV 365


>UniRef50_Q8RCF6 Cluster: Putative uncharacterized protein; n=1;
           Thermoanaerobacter tengcongensis|Rep: Putative
           uncharacterized protein - Thermoanaerobacter
           tengcongensis
          Length = 127

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 254 FLHIASQKGYIDINWDKINKKVDKISDKIEKEATGKSPDWFEKVE 388
           FL  AS K Y+D    KI+  + K+ D I+     K+ DW EK E
Sbjct: 17  FLDFASIK-YLDSTSQKIDSLLSKVEDHIKSGDWEKAKDWVEKAE 60


>UniRef50_A7SRU5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 134

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +2

Query: 188 DNWFHFYEDWKSSSC-WTWRWSHFLHIASQKGYIDINWDKINKKVDKISDK 337
           D W +  + W   S  W++  + + +I++++ YI   W  I+ K   ISD+
Sbjct: 28  DRWSYISDKWSYISAKWSYISAKWSYISAKRSYISAKWSYISDKWSYISDR 78


>UniRef50_A5TX46 Cluster: Possible bacteriophage tail protein; n=1;
           Fusobacterium nucleatum subsp. polymorphum ATCC
           10953|Rep: Possible bacteriophage tail protein -
           Fusobacterium nucleatum subsp. polymorphum ATCC 10953
          Length = 783

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 293 NWDKINKKVDKISDKIEKEATGK 361
           NWDK  KKV ++ DK++K   GK
Sbjct: 403 NWDKFKKKVQELWDKLDKNPLGK 425


>UniRef50_A2DJW1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 285

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +3

Query: 462 IIISLVMTNTVLQNHILFGSIFCWNGYWSNLRKVIQL 572
           II+ LVM +  L N+++  ++FCW  + SN+  +I L
Sbjct: 62  IIMKLVMFSIQLDNNVMNNNLFCWLEFGSNVCFIIAL 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,828,974
Number of Sequences: 1657284
Number of extensions: 8374679
Number of successful extensions: 27929
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27902
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)