Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00180
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   2.2  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    25   2.2  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   5.0  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 187 HPDAVPKISCLVAEVLPISAM 125
           HP  VPK  C   +++PIS +
Sbjct: 393 HPTKVPKPCCAPTKLIPISVL 413


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 221 SSSCWTWRW 247
           S SCW WRW
Sbjct: 4   SRSCWWWRW 12


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 193 VIHPDAVPKISCLVAEVLPISAM 125
           ++HP  VPK  C   ++ PIS +
Sbjct: 395 LMHPTRVPKPCCAPTKLNPISVL 417


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,467
Number of Sequences: 2352
Number of extensions: 9713
Number of successful extensions: 49
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)