Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00180
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011027-1|AAR30187.1|  156|Drosophila melanogaster RE45833p pro...    63   3e-10
AE014134-1797|AAF52886.1|  156|Drosophila melanogaster CG5676-PA...    63   3e-10

>BT011027-1|AAR30187.1|  156|Drosophila melanogaster RE45833p
           protein.
          Length = 156

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
 Frame = +2

Query: 257 LHIASQKGYIDINWDKINKKVDKISDKIEKEATGKSPDWFEKVERFVDRXXXXXXXXXXX 436
           L IA Q+G I INW K++K VDK++DK+E  + G+  +W +K ER+VD            
Sbjct: 56  LEIAHQEGLIKINWSKLDKSVDKLADKVE-ASLGREKNWKDKTERYVDNQLDRAESLLTR 114

Query: 437 XXXXXXXWYNNFTGDDQ-YRATESHSFWQHF 526
                  WY    GD++  +  + H F   F
Sbjct: 115 NGKKVAKWYTKLIGDEEGPKVNDLHIFLASF 145



 Score = 37.9 bits (84), Expect = 0.012
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = +3

Query: 117 ERAIADIGKTSATKQLILGTASGWITGFISM 209
           ++   DIG+ SA  Q+++G +SGW+TG+ +M
Sbjct: 9   KKVFNDIGQRSAYSQMLIGVSSGWVTGYTTM 39


>AE014134-1797|AAF52886.1|  156|Drosophila melanogaster CG5676-PA
           protein.
          Length = 156

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
 Frame = +2

Query: 257 LHIASQKGYIDINWDKINKKVDKISDKIEKEATGKSPDWFEKVERFVDRXXXXXXXXXXX 436
           L IA Q+G I INW K++K VDK++DK+E  + G+  +W +K ER+VD            
Sbjct: 56  LEIAHQEGLIKINWSKLDKSVDKLADKVE-ASLGREKNWKDKTERYVDNQLDRAESLLTR 114

Query: 437 XXXXXXXWYNNFTGDDQ-YRATESHSFWQHF 526
                  WY    GD++  +  + H F   F
Sbjct: 115 NGKKVAKWYTKLIGDEEGPKVNDLHIFLASF 145



 Score = 37.9 bits (84), Expect = 0.012
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = +3

Query: 117 ERAIADIGKTSATKQLILGTASGWITGFISM 209
           ++   DIG+ SA  Q+++G +SGW+TG+ +M
Sbjct: 9   KKVFNDIGQRSAYSQMLIGVSSGWVTGYTTM 39


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,963,595
Number of Sequences: 53049
Number of extensions: 366459
Number of successful extensions: 930
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)