Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00179
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D78586-1|BAA11423.1| 2225|Homo sapiens multifunctional protein C... 124 4e-28
BC065510-1|AAH65510.1| 2225|Homo sapiens carbamoyl-phosphate syn... 124 4e-28
BC014178-1|AAH14178.2| 851|Homo sapiens CAD protein protein. 124 4e-28
AC013413-1|AAY24293.1| 2151|Homo sapiens unknown protein. 124 4e-28
M38561-1|AAA51907.1| 474|Homo sapiens CAD protein. 78 3e-14
>D78586-1|BAA11423.1| 2225|Homo sapiens multifunctional protein CAD
protein.
Length = 2225
Score = 124 bits (298), Expect = 4e-28
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2
Query: 8 WQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDRPVHICHVARKEEILIIKAAKERGVK 187
W +HF++WP +P+ HAE++ AAV+++A L R VHICHVARKEEIL+IKAAK RG+
Sbjct: 1574 WMEHFETWPSHLPIVAHAEQQTVAAVLMVAQLTQRSVHICHVARKEEILLIKAAKARGLP 1633
Query: 188 VTCEVCPHHLFLNSNDIDKIGKGE 259
VTCEV PHHLFL+ +D++++G G+
Sbjct: 1634 VTCEVAPHHLFLSHDDLERLGPGK 1657
Score = 112 bits (270), Expect = 1e-24
Identities = 47/84 (55%), Positives = 65/84 (77%)
Frame = +1
Query: 256 RAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETILPLLLN 435
+ +V P L S +D LW ++++ID FA+DHAPHT+EEK PPPG+PGLET+LPLLL
Sbjct: 1657 KGEVRPELGSRQDVEALWEDMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLETMLPLLLT 1716
Query: 436 AVHQGRLTIEDLINKFHRNPRKIF 507
AV +GRL+++DL+ + H NPR+IF
Sbjct: 1717 AVSEGRLSLDDLLQRLHHNPRRIF 1740
Score = 95.5 bits (227), Expect = 2e-19
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = +3
Query: 504 FYLPEQPNTYVEVDLDYEWVIPTSMEFSKSKWTPFAGMKVCGAIHRVTLRGEIAYVEGQI 683
F+LP Q +TYVEVDL++EW IP+ M FSK+ WTPF G KV G + RV LRGE+AY++GQ+
Sbjct: 1740 FHLPPQEDTYVEVDLEHEWTIPSHMPFSKAHWTPFEGQKVKGTVRRVVLRGEVAYIDGQV 1799
Query: 684 LV 689
LV
Sbjct: 1800 LV 1801
>BC065510-1|AAH65510.1| 2225|Homo sapiens carbamoyl-phosphate
synthetase 2, aspartate transcarbamylase, and
dihydroorotas protein.
Length = 2225
Score = 124 bits (298), Expect = 4e-28
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2
Query: 8 WQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDRPVHICHVARKEEILIIKAAKERGVK 187
W +HF++WP +P+ HAE++ AAV+++A L R VHICHVARKEEIL+IKAAK RG+
Sbjct: 1574 WMEHFETWPSHLPIVAHAEQQTVAAVLMVAQLTQRSVHICHVARKEEILLIKAAKARGLP 1633
Query: 188 VTCEVCPHHLFLNSNDIDKIGKGE 259
VTCEV PHHLFL+ +D++++G G+
Sbjct: 1634 VTCEVAPHHLFLSHDDLERLGPGK 1657
Score = 114 bits (275), Expect = 2e-25
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = +1
Query: 256 RAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETILPLLLN 435
+ +V P L S +D LW N+++ID FA+DHAPHT+EEK PPPG+PGLET+LPLLL
Sbjct: 1657 KGEVRPELGSRQDVEALWENMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLETMLPLLLT 1716
Query: 436 AVHQGRLTIEDLINKFHRNPRKIF 507
AV +GRL+++DL+ + H NPR+IF
Sbjct: 1717 AVSEGRLSLDDLLQRLHHNPRRIF 1740
Score = 95.5 bits (227), Expect = 2e-19
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = +3
Query: 504 FYLPEQPNTYVEVDLDYEWVIPTSMEFSKSKWTPFAGMKVCGAIHRVTLRGEIAYVEGQI 683
F+LP Q +TYVEVDL++EW IP+ M FSK+ WTPF G KV G + RV LRGE+AY++GQ+
Sbjct: 1740 FHLPPQEDTYVEVDLEHEWTIPSHMPFSKAHWTPFEGQKVKGTVRRVVLRGEVAYIDGQV 1799
Query: 684 LV 689
LV
Sbjct: 1800 LV 1801
>BC014178-1|AAH14178.2| 851|Homo sapiens CAD protein protein.
Length = 851
Score = 124 bits (298), Expect = 4e-28
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2
Query: 8 WQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDRPVHICHVARKEEILIIKAAKERGVK 187
W +HF++WP +P+ HAE++ AAV+++A L R VHICHVARKEEIL+IKAAK RG+
Sbjct: 200 WMEHFETWPSHLPIVAHAEQQTVAAVLMVAQLTQRSVHICHVARKEEILLIKAAKARGLP 259
Query: 188 VTCEVCPHHLFLNSNDIDKIGKGE 259
VTCEV PHHLFL+ +D++++G G+
Sbjct: 260 VTCEVAPHHLFLSHDDLERLGPGK 283
Score = 114 bits (275), Expect = 2e-25
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = +1
Query: 256 RAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETILPLLLN 435
+ +V P L S +D LW N+++ID FA+DHAPHT+EEK PPPG+PGLET+LPLLL
Sbjct: 283 KGEVRPELGSRQDVEALWENMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLETMLPLLLT 342
Query: 436 AVHQGRLTIEDLINKFHRNPRKIF 507
AV +GRL+++DL+ + H NPR+IF
Sbjct: 343 AVSEGRLSLDDLLQRLHHNPRRIF 366
Score = 95.5 bits (227), Expect = 2e-19
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = +3
Query: 504 FYLPEQPNTYVEVDLDYEWVIPTSMEFSKSKWTPFAGMKVCGAIHRVTLRGEIAYVEGQI 683
F+LP Q +TYVEVDL++EW IP+ M FSK+ WTPF G KV G + RV LRGE+AY++GQ+
Sbjct: 366 FHLPPQEDTYVEVDLEHEWTIPSHMPFSKAHWTPFEGQKVKGTVRRVVLRGEVAYIDGQV 425
Query: 684 LV 689
LV
Sbjct: 426 LV 427
>AC013413-1|AAY24293.1| 2151|Homo sapiens unknown protein.
Length = 2151
Score = 124 bits (298), Expect = 4e-28
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2
Query: 8 WQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDRPVHICHVARKEEILIIKAAKERGVK 187
W +HF++WP +P+ HAE++ AAV+++A L R VHICHVARKEEIL+IKAAK RG+
Sbjct: 1500 WMEHFETWPSHLPIVAHAEQQTVAAVLMVAQLTQRSVHICHVARKEEILLIKAAKARGLP 1559
Query: 188 VTCEVCPHHLFLNSNDIDKIGKGE 259
VTCEV PHHLFL+ +D++++G G+
Sbjct: 1560 VTCEVAPHHLFLSHDDLERLGPGK 1583
Score = 114 bits (275), Expect = 2e-25
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = +1
Query: 256 RAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETILPLLLN 435
+ +V P L S +D LW N+++ID FA+DHAPHT+EEK PPPG+PGLET+LPLLL
Sbjct: 1583 KGEVRPELGSRQDVEALWENMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLETMLPLLLT 1642
Query: 436 AVHQGRLTIEDLINKFHRNPRKIF 507
AV +GRL+++DL+ + H NPR+IF
Sbjct: 1643 AVSEGRLSLDDLLQRLHHNPRRIF 1666
Score = 95.5 bits (227), Expect = 2e-19
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = +3
Query: 504 FYLPEQPNTYVEVDLDYEWVIPTSMEFSKSKWTPFAGMKVCGAIHRVTLRGEIAYVEGQI 683
F+LP Q +TYVEVDL++EW IP+ M FSK+ WTPF G KV G + RV LRGE+AY++GQ+
Sbjct: 1666 FHLPPQEDTYVEVDLEHEWTIPSHMPFSKAHWTPFEGQKVKGTVRRVVLRGEVAYIDGQV 1725
Query: 684 LV 689
LV
Sbjct: 1726 LV 1727
>M38561-1|AAA51907.1| 474|Homo sapiens CAD protein.
Length = 474
Score = 77.8 bits (183), Expect = 3e-14
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = +3
Query: 540 VDLDYEWVIPTSMEFSKSKWTPFAGMKVCGAIHRVTLRGEIAYVEGQILV 689
VDL++EW IP+ M FSK+ WTPF G KV G + RV LRGE+AY++GQ+LV
Sbjct: 1 VDLEHEWTIPSHMPFSKAHWTPFEGQKVKGTVRRVVLRGEVAYIDGQVLV 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,454,835
Number of Sequences: 237096
Number of extensions: 2005599
Number of successful extensions: 4466
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4466
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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