Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00179
(690 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04813-1|CAA28502.1| 2236|Drosophila melanogaster protein ( Dros... 138 5e-33
AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-P... 138 5e-33
BT025065-1|ABE73236.1| 746|Drosophila melanogaster IP15551p pro... 138 7e-33
AF129814-1|AAD18071.1| 752|Drosophila melanogaster carbamyl pho... 100 4e-21
AY071041-1|AAL48663.2| 492|Drosophila melanogaster RE13129p pro... 36 0.052
AE014298-2701|AAF48826.2| 486|Drosophila melanogaster CG6106-PA... 36 0.052
AY119031-1|AAM50891.1| 503|Drosophila melanogaster LP05695p pro... 30 3.4
AE013599-659|AAF59083.2| 588|Drosophila melanogaster CG8690-PA ... 30 3.4
AE013599-654|AAF59086.1| 579|Drosophila melanogaster CG8693-PA ... 30 3.4
X71866-1|CAA50701.1| 368|Drosophila melanogaster GTP-binding pr... 29 7.9
AY069810-1|AAL39955.1| 368|Drosophila melanogaster SD05004p pro... 29 7.9
AE013599-1386|AAF58591.1| 368|Drosophila melanogaster CG8340-PA... 29 7.9
>X04813-1|CAA28502.1| 2236|Drosophila melanogaster protein (
Drosophila melanogasterrudimentary gene. ).
Length = 2236
Score = 138 bits (335), Expect = 5e-33
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = +1
Query: 259 AKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETILPLLLNA 438
++V P+LCSPEDQ LW NI IDVFATDHAPHT+ EK SE PPPG+PG+ETILPLLL A
Sbjct: 1675 SEVRPLLCSPEDQEALWENIDYIDVFATDHAPHTLAEKRSERPPPGFPGVETILPLLLQA 1734
Query: 439 VHQGRLTIEDLINKFHRNPRKIF 507
VH+GRLT+ED+ KFHRNP+ IF
Sbjct: 1735 VHEGRLTMEDIKRKFHRNPKIIF 1757
Score = 130 bits (314), Expect = 2e-30
Identities = 54/85 (63%), Positives = 68/85 (80%)
Frame = +2
Query: 2 TIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDRPVHICHVARKEEILIIKAAKERG 181
T WQ+H WPK+ P+ HAER+ TAAVI++A LLDR VHICHVARKEEI +I++AKE+G
Sbjct: 1589 TSWQRHLSHWPKRSPIVCHAERQSTAAVIMLAHLLDRSVHICHVARKEEIQLIRSAKEKG 1648
Query: 182 VKVTCEVCPHHLFLNSNDIDKIGKG 256
VKV VCPHHLFL++ D+D +G G
Sbjct: 1649 VKVNLRVCPHHLFLSTKDVDGLGHG 1673
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = +3
Query: 504 FYLPEQPNTYVEVDLDYEWVIPTSMEFSKSKWTPFAGMKVCGAIHRVTLRGEIAYVEGQI 683
F LP+Q TYVEVDLD EW I + SKS WTPF G KV G ++R LRGE+A+ I
Sbjct: 1757 FNLPDQAQTYVEVDLDEEWTITGNEMKSKSGWTPFEGTKVKGLVYRSVLRGELAFRRWPI 1816
Query: 684 LV 689
L+
Sbjct: 1817 LL 1818
>AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-PA,
isoform A protein.
Length = 2224
Score = 138 bits (335), Expect = 5e-33
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = +1
Query: 259 AKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETILPLLLNA 438
++V P+LCSPEDQ LW NI IDVFATDHAPHT+ EK SE PPPG+PG+ETILPLLL A
Sbjct: 1673 SEVRPLLCSPEDQEALWENIDYIDVFATDHAPHTLAEKRSERPPPGFPGVETILPLLLQA 1732
Query: 439 VHQGRLTIEDLINKFHRNPRKIF 507
VH+GRLT+ED+ KFHRNP+ IF
Sbjct: 1733 VHEGRLTMEDIKRKFHRNPKIIF 1755
Score = 138 bits (334), Expect = 7e-33
Identities = 56/85 (65%), Positives = 72/85 (84%)
Frame = +2
Query: 2 TIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDRPVHICHVARKEEILIIKAAKERG 181
T WQ+H WPK+ P+ HAER+ TAAVI++A LLDR VHICHVARKEEI +I++AKE+G
Sbjct: 1587 TSWQRHLSHWPKRSPIVCHAERQSTAAVIMLAHLLDRSVHICHVARKEEIQLIRSAKEKG 1646
Query: 182 VKVTCEVCPHHLFLNSNDIDKIGKG 256
VKVTCEVCPHHLFL++ D++++G G
Sbjct: 1647 VKVTCEVCPHHLFLSTKDVERLGHG 1671
Score = 86.2 bits (204), Expect = 4e-17
Identities = 39/62 (62%), Positives = 46/62 (74%)
Frame = +3
Query: 504 FYLPEQPNTYVEVDLDYEWVIPTSMEFSKSKWTPFAGMKVCGAIHRVTLRGEIAYVEGQI 683
F LP+Q TYVEVDLD EW I + SKS WTPF G KV G +HRV LRGE+A+V+GQ+
Sbjct: 1755 FNLPDQAQTYVEVDLDEEWTITGNEMKSKSGWTPFEGTKVKGRVHRVVLRGEVAFVDGQV 1814
Query: 684 LV 689
LV
Sbjct: 1815 LV 1816
>BT025065-1|ABE73236.1| 746|Drosophila melanogaster IP15551p
protein.
Length = 746
Score = 138 bits (334), Expect = 7e-33
Identities = 56/85 (65%), Positives = 72/85 (84%)
Frame = +2
Query: 2 TIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDRPVHICHVARKEEILIIKAAKERG 181
T WQ+H WPK+ P+ HAER+ TAAVI++A LLDR VHICHVARKEEI +I++AKE+G
Sbjct: 353 TSWQRHLSHWPKRSPIVCHAERQSTAAVIMLAHLLDRSVHICHVARKEEIQLIRSAKEKG 412
Query: 182 VKVTCEVCPHHLFLNSNDIDKIGKG 256
VKVTCEVCPHHLFL++ D++++G G
Sbjct: 413 VKVTCEVCPHHLFLSTKDVERLGHG 437
Score = 32.3 bits (70), Expect = 0.64
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 259 AKVCPVLCSPEDQAELWRN 315
++V P+LCSPEDQ LW N
Sbjct: 439 SEVRPLLCSPEDQEALWEN 457
>AF129814-1|AAD18071.1| 752|Drosophila melanogaster carbamyl
phosphate synthetase II protein.
Length = 752
Score = 99.5 bits (237), Expect = 4e-21
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = +2
Query: 2 TIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDRPVHICHVARKEEILIIKAAKERG 181
T WQ+H WPK+ P+ HAER+ TAAVI++A LLDR VHICHVARKEEI +I++AKE+G
Sbjct: 690 TSWQRHLSHWPKRSPIVCHAERQSTAAVIMLAHLLDRSVHICHVARKEEIQLIRSAKEKG 749
Query: 182 VKV 190
VKV
Sbjct: 750 VKV 752
>AY071041-1|AAL48663.2| 492|Drosophila melanogaster RE13129p
protein.
Length = 492
Score = 35.9 bits (79), Expect = 0.052
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +2
Query: 110 RPVHICHVARKEEILIIKAAKERGVKVTCEVCPHHLFLNSNDIDKIG 250
R +HI + + E + +++ + +G +T + CPH+L L + D+ G
Sbjct: 255 RCIHILNCSSGESLPLVEECRRQGGNLTVDTCPHYLALAAEDVPDCG 301
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 555 EWVIPTSMEFSKSKWTPFAGMKVCGAIHRVTLRGEIAY 668
E+ + + ++ +K TP+AG K+ G +H +RG Y
Sbjct: 427 EFTVGPELLYTATKATPYAGQKLRGVVHATVVRGLHVY 464
>AE014298-2701|AAF48826.2| 486|Drosophila melanogaster CG6106-PA
protein.
Length = 486
Score = 35.9 bits (79), Expect = 0.052
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +2
Query: 110 RPVHICHVARKEEILIIKAAKERGVKVTCEVCPHHLFLNSNDIDKIG 250
R +HI + + E + +++ + +G +T + CPH+L L + D+ G
Sbjct: 249 RCIHILNCSSGESLPLVEECRRQGGNLTVDTCPHYLALAAEDVPDCG 295
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 555 EWVIPTSMEFSKSKWTPFAGMKVCGAIHRVTLRGEIAY 668
E+ + + ++ +K TP+AG K+ G +H +RG Y
Sbjct: 421 EFTVGPELLYTATKATPYAGQKLRGVVHATVVRGLHVY 458
>AY119031-1|AAM50891.1| 503|Drosophila melanogaster LP05695p
protein.
Length = 503
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 155 IIKAAKERGVKVTCEVCPHHLFLNSNDIDKIGKGEQKYVQYYV 283
+IK AKE +K+ + P+H S K K E+ Y YYV
Sbjct: 27 LIKRAKELDLKIVLDFVPNHSSNESEWFLKSVKREKGYEDYYV 69
>AE013599-659|AAF59083.2| 588|Drosophila melanogaster CG8690-PA
protein.
Length = 588
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 155 IIKAAKERGVKVTCEVCPHHLFLNSNDIDKIGKGEQKYVQYYV 283
+IK AKE +K+ + P+H S K K E+ Y YYV
Sbjct: 112 LIKRAKELDLKIVLDFVPNHSSNESEWFLKSVKREKGYEDYYV 154
>AE013599-654|AAF59086.1| 579|Drosophila melanogaster CG8693-PA
protein.
Length = 579
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 155 IIKAAKERGVKVTCEVCPHHLFLNSNDIDKIGKGEQKYVQYYV 283
++ AKE GVK+ + P+H + + GE++Y YY+
Sbjct: 103 MVSRAKELGVKIILDFVPNHSSDECDWFLRSAAGEEEYKDYYM 145
>X71866-1|CAA50701.1| 368|Drosophila melanogaster GTP-binding
protein protein.
Length = 368
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 439 VHQGRLTIEDLINKFHRNPRKIFTY 513
+H R +IED NK HR+ K F Y
Sbjct: 311 LHNERTSIEDFCNKLHRSIAKEFKY 335
>AY069810-1|AAL39955.1| 368|Drosophila melanogaster SD05004p
protein.
Length = 368
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 439 VHQGRLTIEDLINKFHRNPRKIFTY 513
+H R +IED NK HR+ K F Y
Sbjct: 311 LHNERTSIEDFCNKLHRSIAKEFKY 335
>AE013599-1386|AAF58591.1| 368|Drosophila melanogaster CG8340-PA
protein.
Length = 368
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 439 VHQGRLTIEDLINKFHRNPRKIFTY 513
+H R +IED NK HR+ K F Y
Sbjct: 311 LHNERTSIEDFCNKLHRSIAKEFKY 335
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,300,067
Number of Sequences: 53049
Number of extensions: 585375
Number of successful extensions: 1833
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1833
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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