Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00179
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr...    99   3e-21
Z92847-3|CAB07422.2|  323|Caenorhabditis elegans Hypothetical pr...    31   0.59 
U50312-1|AAA92318.1|  285|Caenorhabditis elegans Hypothetical pr...    31   0.59 
Z49125-2|CAA88935.1|  333|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ...    29   4.1  
U97003-5|AAB52272.1|  353|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U41555-9|AAB37034.1|  646|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z68114-6|CAA92160.1|  316|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AF026210-3|AAB71286.3|  382|Caenorhabditis elegans Hypothetical ...    27   9.6  

>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical protein
            D2085.1 protein.
          Length = 2198

 Score = 98.7 bits (235), Expect = 3e-21
 Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = +1

Query: 262  KVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENP--PPGYPGLETILPLLLN 435
            +V P L  PED+  LW N+  ID FATDHAPHT  EK  ++   PPG+PG+E +LPLLL 
Sbjct: 1668 EVRPRLVKPEDRQALWDNMEYIDCFATDHAPHTWAEKTGKDGKIPPGFPGVEYMLPLLLT 1727

Query: 436  AVHQGRLTIEDLINKFHRNPRKIF 507
            AVH G+LT+++L ++   NPR+IF
Sbjct: 1728 AVHDGKLTMKELTDRMSTNPRRIF 1751



 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 39/77 (50%), Positives = 53/77 (68%)
 Frame = +2

Query: 8    WQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDRPVHICHVARKEEILIIKAAKERGVK 187
            W KH  ++P   P+  HAE++  AA++ MA + +R VHI HVA  +EI ++K AK+RG  
Sbjct: 1586 WAKHLSAFPANRPIVCHAEKQTLAAILCMAQMANRAVHIAHVATADEINLVKEAKQRGWN 1645

Query: 188  VTCEVCPHHLFLNSNDI 238
            VTCEVCPHHLFL   D+
Sbjct: 1646 VTCEVCPHHLFLIEEDL 1662



 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 33/61 (54%), Positives = 44/61 (72%)
 Frame = +3

Query: 504  FYLPEQPNTYVEVDLDYEWVIPTSMEFSKSKWTPFAGMKVCGAIHRVTLRGEIAYVEGQI 683
            F LP Q +TY+EVDL+ EW IP +   SK+ WTPFAG KV G +H V +RGE A ++G+I
Sbjct: 1751 FNLPPQDDTYIEVDLNEEWTIPENGGQSKAGWTPFAGRKVFGKVHNVIIRGEEAVIDGRI 1810

Query: 684  L 686
            +
Sbjct: 1811 V 1811


>Z92847-3|CAB07422.2|  323|Caenorhabditis elegans Hypothetical
           protein H01G02.2 protein.
          Length = 323

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +3

Query: 504 FYLPEQPNTYVEVDLDYEWVIPTSMEFSKSKWTPFAGMKVCGAIHRVTLRGE 659
           FY+P+ PN   +V++   W     + F   K+ P   +   G I    +RG+
Sbjct: 151 FYMPKDPNQEYDVNVATRWYRAPELLFGSKKYKPDVDIWAIGCILAELVRGK 202


>U50312-1|AAA92318.1|  285|Caenorhabditis elegans Hypothetical
           protein B0222.1 protein.
          Length = 285

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 316 ISIIDVFATDHAPHTVEEKNSENPPPGYPGLE 411
           ++ + VFAT    HT    N   PPPG+ G +
Sbjct: 213 VTEVPVFATTTTTHTFTTNNGPPPPPGFQGFQ 244


>Z49125-2|CAA88935.1|  333|Caenorhabditis elegans Hypothetical
           protein C47G2.2 protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = +1

Query: 370 KNSENPPPGYPGLETILPLLLNAVHQGRLTIEDL----INKFHRNPRKIFTYQNSLTHML 537
           K+S   PP Y  +  I   +LN+  + +LT+ ++    INKF     K   +QNS+ H L
Sbjct: 122 KSSHAKPP-YSYIALIAMSILNSPEK-KLTLSEICEFIINKFEYYKEKFPAWQNSIRHNL 179

Query: 538 KL 543
            L
Sbjct: 180 SL 181


>AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical
           protein K10E9.1 protein.
          Length = 1451

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/48 (22%), Positives = 25/48 (52%)
 Frame = +2

Query: 14  KHFQSWPKKMPVCTHAEREKTAAVILMASLLDRPVHICHVARKEEILI 157
           +HF  WP+ + +    +     AV   A+L ++ V +C  + + ++L+
Sbjct: 398 RHFSKWPQNLTLPIQKQTINCMAVFFEANLDNQLVDLCQWSDRRKVLV 445


>U97003-5|AAB52272.1|  353|Caenorhabditis elegans Hypothetical
           protein F47C10.7 protein.
          Length = 353

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +1

Query: 73  NRRCHFNGISP*SACTHLSRSTKRRNINYQSRKRKRC 183
           N  CH  G+   +AC    R      I YQ R  K+C
Sbjct: 23  NASCHNYGVLTCNACKMFFRRVVIEQITYQCRNWKKC 59


>U41555-9|AAB37034.1|  646|Caenorhabditis elegans Hypothetical
           protein C03G5.1 protein.
          Length = 646

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 537 EVDLDYEWVIPTSMEFSKSKWTP 605
           EV LDY  VI T+++ S++ W P
Sbjct: 618 EVSLDYRPVIDTTLDKSETDWVP 640


>Z68114-6|CAA92160.1|  316|Caenorhabditis elegans Hypothetical
           protein F17A2.9 protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 266 YVQYYVVLKTKQNFGEI*VSLMFLPQTMHLILWKKRIL 379
           Y+ +++++   Q FG I V L F   T HL LWKK +L
Sbjct: 10  YITFFILVLPTQIFG-IFVILRF--STKHLKLWKKFLL 44


>AF026210-3|AAB71286.3|  382|Caenorhabditis elegans Hypothetical
           protein F48A11.4 protein.
          Length = 382

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 62  EREKTAAVILMASLLDRPVHICHVARK 142
           E EK  ++     LLDRP H+ HVA K
Sbjct: 20  EIEKITSISATDCLLDRPCHLKHVAWK 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,404,562
Number of Sequences: 27780
Number of extensions: 316673
Number of successful extensions: 851
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)