Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00178
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    24   0.87 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   4.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   4.7  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   8.1  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.1  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 158 TPQVYLACGKGPRSSLRALRHGLEVAEKAVSEL 256
           TP  YL  G+GPR+ +   R  L V++ A++ +
Sbjct: 423 TPYTYLPFGEGPRNCI-GQRFALLVSKVALASV 454


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 222 VLKLLKRLYQSSRITECCL 278
           +L+L+K L QSS +  C L
Sbjct: 165 LLQLIKSLRQSSSLEHCTL 183


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 38  EEGDTFFFAPRPLRNLVLV 94
           ++GD F+F+P  + NL  V
Sbjct: 390 DKGDIFWFSPFLVANLAFV 408


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 155 DTPQVYLACGKGPRSSLRALRHGLE 229
           DT      CGKGP   + A++  ++
Sbjct: 359 DTDDFRGICGKGPYPIMNAIKQTIK 383


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 278 GQFDEIKMRNTILTSLCHSLMPHLFF 355
           G+F ++ +R   L S+    + HLFF
Sbjct: 359 GRFAKLLLRLPALRSIGLKCLEHLFF 384


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,518
Number of Sequences: 336
Number of extensions: 2686
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)