Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00176
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 151 2e-35
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 145 8e-34
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 143 4e-33
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 135 1e-30
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 113 4e-24
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 113 5e-24
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 112 7e-24
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 105 1e-21
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 95 1e-18
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 83 8e-15
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 74 4e-12
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 68 2e-10
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 68 2e-10
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 66 8e-10
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 59 9e-08
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 53 7e-06
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 50 4e-05
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 47 4e-04
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 42 0.019
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 41 0.032
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 40 0.043
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 40 0.075
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 38 0.30
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 37 0.53
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 36 0.92
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 2.1
UniRef50_Q0UZB2 Cluster: Putative uncharacterized protein; n=2; ... 34 2.8
UniRef50_Q4A5U6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_Q0PH56 Cluster: TraG-like protein; n=5; Neisseria gonor... 33 8.6
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 151 bits (365), Expect = 2e-35
Identities = 67/74 (90%), Positives = 72/74 (97%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 212 TCQVAYSRIEGDHI 253
TCQ+AYSRIEGD I
Sbjct: 61 TCQIAYSRIEGDKI 74
Score = 100 bits (240), Expect = 3e-20
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +3
Query: 513 AMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
AMKGAVDGGLN+PHS KRFPGYDAES FNAE HRAHIFG HVA+YM +LE +D ++
Sbjct: 131 AMKGAVDGGLNIPHSTKRFPGYDAESKTFNAEAHRAHIFGQHVADYMHALEDEDAEA 187
Score = 60.5 bits (140), Expect(2) = 7e-13
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +1
Query: 415 EYNVEPVDNGPGAFRCYLDVGLARTTTGA 501
EYNVE V+NGPGAFRCYLDVGL RTTTGA
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGA 126
Score = 35.9 bits (79), Expect(2) = 7e-13
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 256 CAAYSHELPRYGVK 297
CAAYSHELPRYGVK
Sbjct: 76 CAAYSHELPRYGVK 89
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 145 bits (352), Expect = 8e-34
Identities = 65/74 (87%), Positives = 70/74 (94%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 212 TCQVAYSRIEGDHI 253
T Q+AY+RIEGD +
Sbjct: 61 TVQIAYARIEGDRV 74
Score = 109 bits (262), Expect = 6e-23
Identities = 46/58 (79%), Positives = 54/58 (93%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
GAMKGAVDGGLN+PHS+KRFPGY AE+ FNA+VHRAHIFG HVA+YMRSLE++DE+S
Sbjct: 161 GAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEES 218
Score = 105 bits (251), Expect = 1e-21
Identities = 49/82 (59%), Positives = 55/82 (67%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
CAAYSHELP+YG++VGLTNYAAAY TG E+NVEPV
Sbjct: 76 CAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPV 135
Query: 436 DNGPGAFRCYLDVGLARTTTGA 501
D+GPGAFRC+LDVGLARTTTGA
Sbjct: 136 DDGPGAFRCFLDVGLARTTTGA 157
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 143 bits (346), Expect = 4e-33
Identities = 62/74 (83%), Positives = 71/74 (95%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHI 253
CQ+AY+RIEGD I
Sbjct: 61 ICQIAYARIEGDMI 74
Score = 96.7 bits (230), Expect = 5e-19
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 218
Score = 96.3 bits (229), Expect = 6e-19
Identities = 46/81 (56%), Positives = 49/81 (60%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 436 DNGPGAFRCYLDVGLARTTTG 498
D PGAF CYLD GLARTTTG
Sbjct: 136 DGQPGAFTCYLDAGLARTTTG 156
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 135 bits (326), Expect = 1e-30
Identities = 61/76 (80%), Positives = 68/76 (89%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 212 TCQVAYSRIEGDHIGA 259
Q+AYS+IEGD + A
Sbjct: 61 VAQLAYSKIEGDVVVA 76
Score = 77.4 bits (182), Expect = 3e-13
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +3
Query: 516 MKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDED 680
MKG DGG+NVPHS RF G+D ES ++NAE HR I G HVA+YM L+++DED
Sbjct: 162 MKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDED 216
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/81 (46%), Positives = 46/81 (56%)
Frame = +1
Query: 259 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 438
+AYSHELPRYG+KVGLTNYAAAY+TG +YNVE +
Sbjct: 77 SAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-E 135
Query: 439 NGPGAFRCYLDVGLARTTTGA 501
F+ LD+GLARTTTG+
Sbjct: 136 GDRAPFKAVLDIGLARTTTGS 156
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 113 bits (272), Expect = 4e-24
Identities = 51/74 (68%), Positives = 59/74 (79%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 212 TCQVAYSRIEGDHI 253
CQ+A S IEGD I
Sbjct: 61 ICQIASSHIEGDKI 74
Score = 66.1 bits (154), Expect = 8e-10
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +3
Query: 513 AMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDED 680
A+KGA DGGLN+PH RFPG +FN E R +I G+HVAEYM S++++D D
Sbjct: 165 ALKGACDGGLNIPHGNNRFPG---SKNEFNPEQLRKNILGIHVAEYMASMKEEDMD 217
Score = 41.5 bits (93), Expect = 0.019
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +1
Query: 262 AYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 432
A S EL RYG+ VGL NYAAAY+TG E +
Sbjct: 78 AKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKE 137
Query: 433 VDNGPGAFRCYLDVGLARTTTG 498
+ + +LDVG+ RTTTG
Sbjct: 138 EEGDRKPIKAFLDVGITRTTTG 159
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 113 bits (271), Expect = 5e-24
Identities = 48/76 (63%), Positives = 61/76 (80%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 212 TCQVAYSRIEGDHIGA 259
CQV Y+ ++GD + A
Sbjct: 61 ICQVIYATLKGDKVVA 76
Score = 62.5 bits (145), Expect = 9e-09
Identities = 25/56 (44%), Positives = 42/56 (75%), Gaps = 3/56 (5%)
Frame = +3
Query: 513 AMKGAVDGGLNVPHSIKRFPGYDAES---TKFNAEVHRAHIFGLHVAEYMRSLEQD 671
A+KGA DGG+++PH+ +RFPG+ ++ K++A VH+ IFG+HV +YM L+++
Sbjct: 157 ALKGAADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHKDRIFGVHVDKYMALLQKE 212
Score = 39.1 bits (87), Expect = 0.099
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 259 AAYSHELPRYGVKVGLTNYAAAYSTG 336
AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 77 AAESTELKRFGLTSGLTNYAAAYATG 102
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 112 bits (270), Expect = 7e-24
Identities = 46/74 (62%), Positives = 64/74 (86%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 212 TCQVAYSRIEGDHI 253
Q+ ++I GD +
Sbjct: 84 IAQIVQAKIVGDEV 97
Score = 71.3 bits (167), Expect = 2e-11
Identities = 28/54 (51%), Positives = 41/54 (75%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQD 671
G +KGAVDGG+ VPH RFPGY+ E + +A+VHR IFG HVA+Y++ ++++
Sbjct: 190 GVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFGKHVADYLKQVKEE 243
Score = 54.0 bits (124), Expect = 3e-06
Identities = 34/87 (39%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +1
Query: 259 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 438
AAY+HELP +G++ GLTNYAAAY+TG V
Sbjct: 100 AAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKK 159
Query: 439 NGPG------AFRCYLDVGLARTTTGA 501
+ G F+ LDVGLARTTTGA
Sbjct: 160 DDEGDDEERFPFKAILDVGLARTTTGA 186
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 105 bits (252), Expect = 1e-21
Identities = 56/101 (55%), Positives = 67/101 (66%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 212 TCQVAYSRIEGDHIGALLIHMSCHVMV*RLV*QIMLQHIQL 334
T Q+ + I GD I M+C M + V QI Q I L
Sbjct: 72 TAQIISASIAGD---MRPIPMNCLTMGLKWVLQITRQLIVL 109
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 95.1 bits (226), Expect = 1e-18
Identities = 43/69 (62%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Frame = +2
Query: 47 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 220
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 221 VAYSRIEGD 247
V Y+ + GD
Sbjct: 73 VVYATLSGD 81
Score = 77.8 bits (183), Expect = 2e-13
Identities = 37/82 (45%), Positives = 45/82 (54%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
CAAYSHELP+YG+K GLTNYAA Y+TG +Y+VE
Sbjct: 85 CAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQG 144
Query: 436 DNGPGAFRCYLDVGLARTTTGA 501
D F+C+LD GL RT+TGA
Sbjct: 145 DEEARPFKCFLDTGLVRTSTGA 166
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = +3
Query: 513 AMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDED 680
A+KGAVDGGL++PH+ KRF GYD + + + +I G VAEY +++++ +
Sbjct: 171 ALKGAVDGGLDIPHNEKRFAGYDLQDKSHDPDTLERYIKGGVVAEYAEEMQEEEPE 226
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 82.6 bits (195), Expect = 8e-15
Identities = 35/68 (51%), Positives = 46/68 (67%)
Frame = +2
Query: 44 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 223
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 224 AYSRIEGD 247
+ + GD
Sbjct: 64 VVAELTGD 71
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/82 (41%), Positives = 42/82 (51%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
C A S ELP+YG+K+GL+NY AAY+TG EY +
Sbjct: 75 CQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKTEITEEYLNDEE 131
Query: 436 DNGPGAFRCYLDVGLARTTTGA 501
+ P F+ LDVGLARTTTGA
Sbjct: 132 NRRP--FKVILDVGLARTTTGA 151
Score = 39.1 bits (87), Expect = 0.099
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 12/67 (17%)
Frame = +3
Query: 516 MKGAVDGGLNVPHSIKR----FPGYDAESTKFNAEV--------HRAHIFGLHVAEYMRS 659
MKGAVDGGL +PH++ R F D ++ K +V ++ +I G VA+YMR
Sbjct: 157 MKGAVDGGLFIPHNVCRLACKFDKKDKDAGKDRKDVPAEKIVKGNQYYILGGAVADYMRK 216
Query: 660 LEQDDED 680
L+++ E+
Sbjct: 217 LKKESEE 223
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 73.7 bits (173), Expect = 4e-12
Identities = 28/57 (49%), Positives = 43/57 (75%)
Frame = +2
Query: 83 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 253
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D +
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRV 363
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGY-----DAESTKFNAEVHRAHIFGLHVAEYMRSLEQDD 674
G +KGA DGG+N+PHS RFPGY + ES+K+ E H+A IFG H+ YM+ L+
Sbjct: 450 GVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKPEDHKARIFGKHIDAYMKHLKGQS 509
Query: 675 EDS 683
++
Sbjct: 510 NEA 512
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/81 (37%), Positives = 37/81 (45%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
CAA S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 365 CAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDED 424
Query: 436 DNGPGAFRCYLDVGLARTTTG 498
F+ LD GL RTTTG
Sbjct: 425 QKEKKPFKAILDAGLVRTTTG 445
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 124
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGY--DAEST-KFNAEVHRAHIFGLHVAEYMRSLEQDDED 680
GA+KGA DGGL+VPHS KRFPGY D E+ ++A+ HR IFG HVA YM L+++D +
Sbjct: 110 GALKGACDGGLHVPHSEKRFPGYSVDEENNGTYDAQAHRDRIFGAHVASYMEYLKEEDPE 169
Score = 54.0 bits (124), Expect = 3e-06
Identities = 32/80 (40%), Positives = 37/80 (46%)
Frame = +1
Query: 259 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 438
+A S EL YGVKVGLTNYAAAY TG Y+VE +
Sbjct: 26 SADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKLEVDGEVYHVEEEE 85
Query: 439 NGPGAFRCYLDVGLARTTTG 498
N F+ LDVG+ TTG
Sbjct: 86 NERRPFKALLDVGVKNVTTG 105
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
GA+K VD GL++PHS K FPGYD+ S +FNAEV+ I G +V +YM L ++DED+
Sbjct: 83 GALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVDYMCFLMEEDEDA 140
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTG 336
CAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 26 CAAYAHELPKSGVKVGLTNYAAAYCIG 52
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 67.7 bits (158), Expect = 2e-10
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +2
Query: 59 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 238
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 239 EGDHI 253
+GD +
Sbjct: 64 DGDRV 68
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/57 (43%), Positives = 37/57 (64%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDED 680
GA+KGA D GLNVPHS +F G+ + + F+A+ IFG +++EYM+ L D +
Sbjct: 154 GALKGASDAGLNVPHSAAKFYGHKPDGS-FDAKELHDRIFGYNISEYMKQLRDGDPE 209
Score = 46.4 bits (105), Expect = 7e-04
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 262 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVD 438
A S EL RYG+ G TNY+AAY+TG Y+V + +D
Sbjct: 72 ADSRELERYGINFGATNYSAAYATG--FLIGRRALTAMSLDEVYRPKEIDGTYSVTKDID 129
Query: 439 NGPGAFRCYLDVGLARTTTGA 501
A R +LD+GLAR+T GA
Sbjct: 130 GEKKAPRVFLDIGLARSTRGA 150
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 66.1 bits (154), Expect = 8e-10
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +2
Query: 56 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 235
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 236 IEGDHI 253
++GD I
Sbjct: 69 VDGDFI 74
Score = 39.1 bits (87), Expect = 0.099
Identities = 16/57 (28%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +3
Query: 513 AMKGAVDGGLNVPHSIKRFPGYDAESTKFNA-EVHRAHIFGLHVAEYMRSLEQDDED 680
+MKG+VD G+N+PH+ + + ++ + ++ E+ G+H+ +Y+ L+ +DE+
Sbjct: 148 SMKGSVDSGINIPHNYNKI--FKVKNNEIDSKELFNERSKGIHIIKYIDLLKNEDEE 202
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 59.3 bits (137), Expect = 9e-08
Identities = 45/131 (34%), Positives = 60/131 (45%)
Frame = +2
Query: 80 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIGA 259
+++F+R +EGKTDYYARKRL +QDKN+YNTP+ S + +
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPEXD---DSSCNXQRYHLPDCIXKKFXSSV 92
Query: 260 LLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDCFKDLDLTPYTLAQQMSQVMNTMLNLST 439
+HM MV +L IMLQ I L C L T A+ +NTM T
Sbjct: 93 PCMHMKFQNMVXKLAXNIMLQPIALACCWPAGFXIGLAWTRSMKAKWRXMEVNTMWKALT 152
Query: 440 MDQEHLDVIWM 472
+ IWM
Sbjct: 153 VSLVPSLAIWM 163
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 52.8 bits (121), Expect = 7e-06
Identities = 21/52 (40%), Positives = 37/52 (71%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLE 665
G +K A+DG LN+PH+ +RF G ++ + +A+VHR I+G +V+ Y+ +L+
Sbjct: 74 GVLKEALDGSLNIPHNDRRFVGSSKDNKQLDAKVHRKSIYGGYVSAYIETLK 125
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/60 (46%), Positives = 38/60 (63%)
Frame = +2
Query: 74 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 253
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +2
Query: 74 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 247
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLL-----SSGTP--RMVVRKTNRQIIVQLVVPEVEGD 56
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.5 bits (93), Expect = 0.019
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +2
Query: 74 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 247
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGD 56
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 40.7 bits (91), Expect = 0.032
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +2
Query: 74 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 247
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGD 56
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 40.3 bits (90), Expect = 0.043
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 77 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 247
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGD 56
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 39.5 bits (88), Expect = 0.075
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +2
Query: 71 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 250
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 251 I 253
+
Sbjct: 58 V 58
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 37.5 bits (83), Expect = 0.30
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 205
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 206 DVTCQVAYSRIEGDHIGA 259
+++ + +S + GD I A
Sbjct: 59 NLSGVITFSSLSGDTIVA 76
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 585 ESTKFNAEVHRAHIFGLHVAEYMRSLEQDDED 680
+S + +AEVHR +I+G HVA YM L +D+ +
Sbjct: 4 DSKQLDAEVHRKYIYGGHVAAYMNILMEDEPE 35
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 35.9 bits (79), Expect = 0.92
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +2
Query: 92 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 253
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH+
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHV 54
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 212 TCQVA 226
C +A
Sbjct: 161 QCSLA 165
>UniRef50_Q0UZB2 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 437
Score = 34.3 bits (75), Expect = 2.8
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIF 629
G A++G L VP I R+PG E T FN VH HIF
Sbjct: 274 GTYHTAMEGTLRVPFII-RWPGNVPEHTTFNEMVHVTHIF 312
>UniRef50_Q4A5U6 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma synoviae 53|Rep: Putative uncharacterized
protein - Mycoplasma synoviae (strain 53)
Length = 667
Score = 32.7 bits (71), Expect = 8.6
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = -3
Query: 370 QVFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTNMVTFNPRVGHLACYIFVGET 191
Q+F A+ + + Q +LQ L ++ N+ TN +T N + L +F
Sbjct: 432 QIFLAIQTINSSQFKILQDALIQDQKNNTTIKANNETFTNELT-NKNLISLMADLFTNSI 490
Query: 190 HNQTIFRCVIF 158
HNQTI R F
Sbjct: 491 HNQTISRLSYF 501
>UniRef50_Q0PH56 Cluster: TraG-like protein; n=5; Neisseria
gonorrhoeae|Rep: TraG-like protein - Neisseria
gonorrhoeae
Length = 1138
Score = 32.7 bits (71), Expect = 8.6
Identities = 24/90 (26%), Positives = 40/90 (44%)
Frame = -3
Query: 367 VFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTNMVTFNPRVGHLACYIFVGETH 188
+F V + + + NMLQ+N + N A K RT + N G++A +F G
Sbjct: 204 LFTNVSQIASRRGNMLQYNGKSKTMTCNEAAKELKDRTRFYSKNYLPGYIADRVFAGLGT 263
Query: 187 NQTIFRCVIFVLVLNNEAFTSIIISFPFTT 98
N V ++ L N +F ++ + F T
Sbjct: 264 NSAGINRVNALVTLGNSSFQYLLDNARFDT 293
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,298,094
Number of Sequences: 1657284
Number of extensions: 13178377
Number of successful extensions: 31112
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31083
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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