Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00176
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   146   6e-37
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   5.1  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  146 bits (354), Expect = 6e-37
 Identities = 64/74 (86%), Positives = 71/74 (95%)
 Frame = +2

Query: 32  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
           MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 212 TCQVAYSRIEGDHI 253
           TCQ+AY RIEGD I
Sbjct: 61  TCQIAYRRIEGDRI 74



 Score =  106 bits (254), Expect = 7e-25
 Identities = 44/58 (75%), Positives = 53/58 (91%)
 Frame = +3

Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
           GAMKGAVDGGLN+PHS+KRFPGY AE+  FNAE+HR HIFGLHVA YMR+LE++DE++
Sbjct: 161 GAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEA 218



 Score =  103 bits (248), Expect = 4e-24
 Identities = 51/82 (62%), Positives = 52/82 (63%)
 Frame = +1

Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
           CAAYSHELPRYGVKVGLTNYAAAY TG                          EY VEPV
Sbjct: 76  CAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPV 135

Query: 436 DNGPGAFRCYLDVGLARTTTGA 501
           D GP AFRCYLDVGLARTTTG+
Sbjct: 136 DEGPAAFRCYLDVGLARTTTGS 157


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 374 LTPYTLAQQMSQVMNTMLNLSTMDQEHL 457
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,229
Number of Sequences: 2352
Number of extensions: 15628
Number of successful extensions: 45
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)