Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00176
(684 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 143 6e-34
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 143 6e-34
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 143 6e-34
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 143 6e-34
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 143 6e-34
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 143 6e-34
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 143 6e-34
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 143 6e-34
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 97 7e-20
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 96 9e-20
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 143 bits (346), Expect = 6e-34
Identities = 62/74 (83%), Positives = 71/74 (95%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHI 253
CQ+AY+RIEGD I
Sbjct: 61 ICQIAYARIEGDMI 74
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 218
Score = 94.3 bits (224), Expect = 4e-19
Identities = 45/81 (55%), Positives = 48/81 (59%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
CA Y+HELP+YGVKVGLTNYAAAY TG EYNVE +
Sbjct: 76 CARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 436 DNGPGAFRCYLDVGLARTTTG 498
D PGAF CYLD GLARTTTG
Sbjct: 136 DGQPGAFTCYLDAGLARTTTG 156
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 143 bits (346), Expect = 6e-34
Identities = 62/74 (83%), Positives = 71/74 (95%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHI 253
CQ+AY+RIEGD I
Sbjct: 61 ICQIAYARIEGDMI 74
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 218
Score = 96.3 bits (229), Expect = 9e-20
Identities = 46/81 (56%), Positives = 49/81 (60%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 436 DNGPGAFRCYLDVGLARTTTG 498
D PGAF CYLD GLARTTTG
Sbjct: 136 DGQPGAFTCYLDAGLARTTTG 156
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 143 bits (346), Expect = 6e-34
Identities = 62/74 (83%), Positives = 71/74 (95%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHI 253
CQ+AY+RIEGD I
Sbjct: 61 ICQIAYARIEGDMI 74
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 218
Score = 96.3 bits (229), Expect = 9e-20
Identities = 46/81 (56%), Positives = 49/81 (60%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 436 DNGPGAFRCYLDVGLARTTTG 498
D PGAF CYLD GLARTTTG
Sbjct: 136 DGQPGAFTCYLDAGLARTTTG 156
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 143 bits (346), Expect = 6e-34
Identities = 62/74 (83%), Positives = 71/74 (95%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHI 253
CQ+AY+RIEGD I
Sbjct: 61 ICQIAYARIEGDMI 74
Score = 97.1 bits (231), Expect = 5e-20
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDEDA 218
Score = 96.3 bits (229), Expect = 9e-20
Identities = 46/81 (56%), Positives = 49/81 (60%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 436 DNGPGAFRCYLDVGLARTTTG 498
D PGAF CYLD GLARTTTG
Sbjct: 136 DGQPGAFTCYLDAGLARTTTG 156
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 143 bits (346), Expect = 6e-34
Identities = 62/74 (83%), Positives = 71/74 (95%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHI 253
CQ+AY+RIEGD I
Sbjct: 61 ICQIAYARIEGDMI 74
Score = 51.2 bits (117), Expect = 3e-06
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAA 324
CAAY+HELP+YGVKVGLTNYAAA
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 143 bits (346), Expect = 6e-34
Identities = 62/74 (83%), Positives = 71/74 (95%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHI 253
CQ+AY+RIEGD I
Sbjct: 61 ICQIAYARIEGDMI 74
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 218
Score = 96.3 bits (229), Expect = 9e-20
Identities = 46/81 (56%), Positives = 49/81 (60%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 436 DNGPGAFRCYLDVGLARTTTG 498
D PGAF CYLD GLARTTTG
Sbjct: 136 DGQPGAFTCYLDAGLARTTTG 156
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 143 bits (346), Expect = 6e-34
Identities = 62/74 (83%), Positives = 71/74 (95%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHI 253
CQ+AY+RIEGD I
Sbjct: 61 ICQIAYARIEGDMI 74
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 218
Score = 96.3 bits (229), Expect = 9e-20
Identities = 46/81 (56%), Positives = 49/81 (60%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 436 DNGPGAFRCYLDVGLARTTTG 498
D PGAF CYLD GLARTTTG
Sbjct: 136 DGQPGAFTCYLDAGLARTTTG 156
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 143 bits (346), Expect = 6e-34
Identities = 62/74 (83%), Positives = 71/74 (95%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 212 TCQVAYSRIEGDHI 253
CQ+AY+RIEGD I
Sbjct: 68 ICQIAYARIEGDMI 81
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 168 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 225
Score = 96.3 bits (229), Expect = 9e-20
Identities = 46/81 (56%), Positives = 49/81 (60%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE +
Sbjct: 83 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 142
Query: 436 DNGPGAFRCYLDVGLARTTTG 498
D PGAF CYLD GLARTTTG
Sbjct: 143 DGQPGAFTCYLDAGLARTTTG 163
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESTKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 683
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 9 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 66
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 96.3 bits (229), Expect = 9e-20
Identities = 46/81 (56%), Positives = 49/81 (60%)
Frame = +1
Query: 256 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 435
CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE +
Sbjct: 26 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 85
Query: 436 DNGPGAFRCYLDVGLARTTTG 498
D PGAF CYLD GLARTTTG
Sbjct: 86 DGQPGAFTCYLDAGLARTTTG 106
Score = 40.3 bits (90), Expect = 0.006
Identities = 15/24 (62%), Positives = 22/24 (91%)
Frame = +2
Query: 182 LIVRLSNKDVTCQVAYSRIEGDHI 253
+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMI 24
Score = 33.1 bits (72), Expect = 0.95
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPH 554
GA+KGAVDGGL++PH
Sbjct: 111 GALKGAVDGGLSIPH 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,944,207
Number of Sequences: 237096
Number of extensions: 2169893
Number of successful extensions: 3770
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3762
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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