Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00175
(736 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_37317| Best HMM Match : EGF_CA (HMM E-Value=6.6e-25) 31 0.73
SB_27150| Best HMM Match : VWA (HMM E-Value=1.1e-13) 31 0.97
SB_30615| Best HMM Match : rve (HMM E-Value=0.13) 31 1.3
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_24278| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41) 30 1.7
SB_41869| Best HMM Match : Laminin_EGF (HMM E-Value=9.7e-23) 30 1.7
SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0) 30 1.7
SB_17660| Best HMM Match : Meleagrin (HMM E-Value=5.9) 30 2.2
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 30 2.2
SB_766| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_48913| Best HMM Match : TSP_1 (HMM E-Value=1.8e-11) 29 3.0
SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.9
SB_9503| Best HMM Match : Bac_DNA_binding (HMM E-Value=3.3) 29 3.9
SB_5182| Best HMM Match : TSP_1 (HMM E-Value=1.1e-11) 29 3.9
SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_49286| Best HMM Match : Laminin_N (HMM E-Value=0) 29 5.2
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_13198| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_38612| Best HMM Match : TSP_1 (HMM E-Value=3.3e-11) 29 5.2
SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45) 29 5.2
SB_54186| Best HMM Match : Herpes_U44 (HMM E-Value=7.9) 28 6.8
SB_23022| Best HMM Match : CUB (HMM E-Value=0) 28 6.8
SB_1075| Best HMM Match : rve (HMM E-Value=0.0089) 28 6.8
SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23) 28 6.8
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_7462| Best HMM Match : PspA_IM30 (HMM E-Value=0.15) 28 9.0
SB_38996| Best HMM Match : Pepsin-I3 (HMM E-Value=1.7) 28 9.0
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 4 GKPMCTRVECITNNTPKKSELIQGRDCAPGSTWSNQC 114
G+PMC EC+ N PK S + G D G T+ N+C
Sbjct: 1883 GEPMC---ECVVNECPKNSSKVCGSD---GWTYDNEC 1913
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 31.5 bits (68), Expect = 0.73
Identities = 23/48 (47%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Frame = +1
Query: 82 CAP-GSTWSNQCNS--CRCNADGYAICSDEACAEHIDEPKK---DCAP 207
CAP GS+ +N S C CNA GYA E C E IDE CAP
Sbjct: 604 CAPIGSSCTNNAGSYTCSCNA-GYA-GDGETCVEDIDECSSGAHTCAP 649
>SB_37317| Best HMM Match : EGF_CA (HMM E-Value=6.6e-25)
Length = 86
Score = 31.5 bits (68), Expect = 0.73
Identities = 23/48 (47%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Frame = +1
Query: 82 CAP-GSTWSNQCNS--CRCNADGYAICSDEACAEHIDEPKK---DCAP 207
CAP GS+ +N S C CNA GYA E C E IDE CAP
Sbjct: 12 CAPIGSSCTNNAGSFTCSCNA-GYA-GDGETCVEDIDECSSGAHTCAP 57
>SB_27150| Best HMM Match : VWA (HMM E-Value=1.1e-13)
Length = 600
Score = 31.1 bits (67), Expect = 0.97
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +2
Query: 548 ECKPNETFQIGC-NRCRCNSEGTLYSCTRV----GCLEAEEKNHTLSRKVRAS-QQETVK 709
+C N+T C RC+C S G L CTR+ + EE+ +S +R S Q +K
Sbjct: 216 KCSGNKTVYDECMRRCQC-SAGQLVKCTRIRKDFPSMSLEERRRFISALIRVSTDQAFIK 274
Query: 710 T 712
T
Sbjct: 275 T 275
>SB_30615| Best HMM Match : rve (HMM E-Value=0.13)
Length = 284
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 280 GASVITISEVASRKNWKP--KEPKYLS*GRLKTRPKQSFASRTECSSR--TATLAGVTKT 447
GA + I ASR W+P K K S G + R + + EC+ R A L G T
Sbjct: 41 GAGALAIGYTASRLLWQPLLKCRKCRSFGDIANRSLKLRRADRECAKRFANAVLRGPTDL 100
Query: 448 VLPSTA-PEESAYPCCR 495
++A PE++A C R
Sbjct: 101 RKTASALPEQTATACWR 117
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +1
Query: 370 TRPKQSFASRTECSSRTATLAGVTKTVLPSTAPEESAYPCCRKTVTRSRELEPETSDAKG 549
T P+ + AS T +S T T S APE +A P T + PET+ A
Sbjct: 557 TAPETTAASETTAASETTAAPKTTAAPKTSAAPETTAAP--ETTAAPETTMAPETTTAPE 614
Query: 550 VQAE 561
A+
Sbjct: 615 TTAK 618
>SB_24278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 363
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 241 WCTSEVNPCALRWGASVITISEVASRKNWKPKEPKYLS*GRLKTRPKQSFASRTECS 411
W T C++R GA ++++ KP PKY S + K + K+S R EC+
Sbjct: 197 WHTRAWGECSVRCGAGQQKRRVFCAKQDGKPLAPKYCSKTKTKPQNKRSCYGR-ECN 252
>SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41)
Length = 474
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Frame = +1
Query: 112 CNSCRCNADGYAICSDEACAEHID----EPKKDCAPKTMWKN--ECNTCWCTSEVNPCAL 273
C + RCN D ++ +D+ E +D +P + PK ++++ EC+ + T E AL
Sbjct: 153 CGNVRCNVDPFSKRTDKEVWEALDKVHLKPWVETLPKQLYQDLAECSAAFSTGEKQLVAL 212
Query: 274 R----WGASVITISEVASRKNWK 330
+ ++ + E S ++K
Sbjct: 213 ARALVYNTKILVLDEATSVVDYK 235
>SB_41869| Best HMM Match : Laminin_EGF (HMM E-Value=9.7e-23)
Length = 198
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +2
Query: 551 CKPNE--TFQIGCNRCRCNSEGTLYSCTRV 634
CKP + GC C CN GTLYS T V
Sbjct: 129 CKPQYWGLSKDGCKACDCNLPGTLYSNTSV 158
>SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1706
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +2
Query: 551 CKPNE--TFQIGCNRCRCNSEGTLYSCTRV 634
CKP + GC C CN GTLYS T V
Sbjct: 1051 CKPQYWGLSKDGCKACDCNLPGTLYSNTSV 1080
>SB_17660| Best HMM Match : Meleagrin (HMM E-Value=5.9)
Length = 310
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +1
Query: 10 PMCTRVECITNNTPKKS--ELIQGRDCAPGSTWSNQCNSCRCNADGYAICSDEACAEHID 183
P+ V C + P+ + GRD AP T QC C+ + SDE C +H +
Sbjct: 146 PLYPEVPCDSRRPPRSDTYNALCGRD-AP-YTPGGQCRHNNCSEYDVSYGSDECCHDHPE 203
Query: 184 EPKKDCAPKTMWKNE 228
+ C+ + E
Sbjct: 204 RRRVGCSHHCCYPTE 218
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Frame = +1
Query: 37 TNNTPKKSELIQGRDCAPGSTWSNQC----NSC----RCNADGYAICSDEACAEHIDEPK 192
T+ P S + G + G T++N+C +SC + C +AC+ H+ E
Sbjct: 958 TSECPVASSFVCGSN---GKTYTNECLLKVDSCAEQKEISVKHKGAC--DACSNHVCEEN 1012
Query: 193 KDCAPKTMWKNECN 234
+DC KT +++EC+
Sbjct: 1013 EDCDKKT-YQSECH 1025
>SB_766| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +3
Query: 234 HVLVHFGGKP-MCTKMGCISYNNFGSGVTEKLETKGTEIPELRSSQNTTKAIVCVAN 401
HVLVH G KP +C GC GS + L E P + KA AN
Sbjct: 1172 HVLVHTGEKPYVCPADGCGKAFTAGSSLNIHLRKHTGEKPYRCEESSCNKAYTTAAN 1228
>SB_48913| Best HMM Match : TSP_1 (HMM E-Value=1.8e-11)
Length = 1068
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/82 (26%), Positives = 33/82 (40%)
Frame = +1
Query: 82 CAPGSTWSNQCNSCRCNADGYAICSDEACAEHIDEPKKDCAPKTMWKNECNTCWCTSEVN 261
C PGS + +C DG + D CA +DC T C W T+E +
Sbjct: 703 CGPGS--QERDVACLRIDDGTYV-RDSVCAGAKPVTTQDCETAT-----CTASWYTTEWS 754
Query: 262 PCALRWGASVITISEVASRKNW 327
PC+ G + S + R+ +
Sbjct: 755 PCSATCGKGTQSRSVICRRETF 776
>SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1487
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 545 KECKPNETFQIG-CNRCRCNSEGTL 616
K C P F G C+RC+CN G++
Sbjct: 376 KHCVPGHFFLQGYCSRCQCNGHGSI 400
>SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 651
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 118 SCRCNADGYAICSDEACAEHIDEPKKD---CAPKTMWKNECNTCWC 246
SC C + G+A+ SD+ IDE K + C+ + + N C C
Sbjct: 4 SCSCRS-GFALASDKRACRDIDECKTNNGGCSQRCLNTNGSRACAC 48
>SB_9503| Best HMM Match : Bac_DNA_binding (HMM E-Value=3.3)
Length = 110
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 639 AWKPRKRTTPCLEKFVRPNRKPSKPAS 719
A KP+ R P L+ +P RKP K AS
Sbjct: 50 AGKPKLRPLPTLQSIGKPPRKPQKTAS 76
>SB_5182| Best HMM Match : TSP_1 (HMM E-Value=1.1e-11)
Length = 1417
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 GKPMCTRVEC--ITNNTPKKSELIQGRDCAPGSTWSNQCNSCRCNADGYAICSDEACAEH 177
G+ +C +C +++ PK I G++CA +N+ C C+ GY I S +CA+
Sbjct: 505 GEDICINHKCESLSSLRPKSCPSIGGKECAGHGVCTNE-GKCACD-PGYDIAS--SCAKA 560
Query: 178 IDEPKKDCAPKTMWKNECN 234
+ W EC+
Sbjct: 561 YSPRDGSWGKWSQW-TECS 578
>SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 639 AWKPRKRTTPCLEKFVRPNRKPSKPAS 719
A KP+ R P L+ +P RKP K AS
Sbjct: 785 AGKPKLRPLPTLQSIGKPPRKPQKTAS 811
>SB_49286| Best HMM Match : Laminin_N (HMM E-Value=0)
Length = 1465
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 572 QIGCNRCRCNSEGTLYSCTRVGCLEAEEKNHTLSRKVRASQQETVK 709
++GC C CN +G+L V C E E+ L+ +V A++ + ++
Sbjct: 1075 ELGCLACNCNLQGSL----NVTCDEQGEEIMKLNDRVTATRNKVIE 1116
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 370 TRPKQSFASRTECSSRTATLAGVTKTVLPSTAPEESAYPCCRKTVT 507
T P + +T + T KT +P+T E+ P RKT T
Sbjct: 1410 TAPPTTVEDKTREEATTKPTTTTRKTTIPTTTASETKPPTIRKTTT 1455
>SB_13198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 364 LKTRPKQSFASRTECSSRTATLAGVTKTVLPSTAPEESAYPCCRKTVTRS 513
L R + S + S+RT T+AG L A +A+ CCRK R+
Sbjct: 172 LSRRRRSSSGAVVGGSTRTGTIAGAVFGTLIGIAVLIAAFICCRKHFCRT 221
>SB_38612| Best HMM Match : TSP_1 (HMM E-Value=3.3e-11)
Length = 900
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +1
Query: 157 DEACAEHIDEPKKDCAPKTMWKNECNTCWCTSEVNPCALRWGASVITISEVASRKNW 327
D CA +DC T E W T+E +PC+ G + S + R+ +
Sbjct: 689 DSVCAGAKPVTSQDCETATCTPGEQIPTWYTTEWSPCSATCGRGTQSRSVICRRETF 745
>SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45)
Length = 622
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Frame = +1
Query: 49 PKKSELIQGRDCAPGSTWSNQCNSCRCNAD----GYAICS--DEACAEHID-----EPKK 195
P L +C P + N N C NAD YA CS + C +ID E ++
Sbjct: 220 PSNMFLCPSGECIPTTALCNNENDCSDNADERNCQYANCSLNNLGCRRNIDITQVNEEER 279
Query: 196 DCAP--KTMWKNECN 234
C P T NEC+
Sbjct: 280 KCKPLLSTYVDNECH 294
>SB_54186| Best HMM Match : Herpes_U44 (HMM E-Value=7.9)
Length = 377
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 623 KNTMYPQNYIGIYCNQFGMFHSAC 552
K Y NY+ +Y FG+FH+ C
Sbjct: 47 KGVRYLTNYLKVYYLPFGVFHNQC 70
>SB_23022| Best HMM Match : CUB (HMM E-Value=0)
Length = 1307
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = -3
Query: 434 PASVAVLDEHSVRDANDCFGRVLRRP*LRYFGSFG--FQFFRDATSEIVITDAPHLSAHG 261
P V D+HS ++A+DC V L +F +Q +D T +I +T H+ +
Sbjct: 158 PGFVLHPDQHSCKEASDCGSTVTSLTGLIMSPNFPGVYQHKKDCTWKITVTPGSHVELNF 217
Query: 260 FTSEVHQHVLHSFFHI-VFGAQSFLGSSMCSAQASSLQMAYPSALHLQLL 114
++ + + ++ VF S+ ++L + S H L+
Sbjct: 218 RFLQIEEAKECRYDYVEVFSGTGHQAESLGRICGNNLPSPFRSRAHKMLI 267
>SB_1075| Best HMM Match : rve (HMM E-Value=0.0089)
Length = 1617
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 613 CTLRITSASIATNLECFIRLALLWRRWFR--VQVLGISSPSSGSMG 482
C R SAS + L C +A+L R V V+GI SPSSGS G
Sbjct: 335 CDERGFSASRSGGLRC-ASVAMLCAACIRDDVLVIGIDSPSSGSNG 379
>SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23)
Length = 198
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 DGKPMCTRVECITNNTPKKSELIQ-GRDCAPGSTWSNQCNSCRCNAD 138
DG P CT C ++ ++ E Q G P + QC C CN +
Sbjct: 39 DGLPTCTN--CSESHAGRQCERCQDGYYGTPTDPVNGQCRKCNCNGN 83
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 109 QCNSCRCNADGYAICSDEACAEHIDEPKK-DCAPKTMWKNECNTC 240
QCN C+ G+ C C +E DC P T+ N C C
Sbjct: 668 QCNRCKTGYYGFPNCKKCQCVFCNEETGACDCPPNTVGLN-CELC 711
>SB_7462| Best HMM Match : PspA_IM30 (HMM E-Value=0.15)
Length = 393
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +2
Query: 509 DPENLNPKPATPKECKPNETFQIGCNRCRCNSEGTLYSCTRVGCLEAEEKNHTLSRKVRA 688
DP+++ KPA P +P ET G R R S G S R L AE+K R++
Sbjct: 57 DPKDIGIKPAAPVIAQPPETSHRGL-RKRSRSRGP--SLDRHLKLSAEQKCDIAQRELEE 113
Query: 689 SQQETVK 709
+ + K
Sbjct: 114 LRDDIEK 120
>SB_38996| Best HMM Match : Pepsin-I3 (HMM E-Value=1.7)
Length = 865
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 215 CGKMNATRVGALRR*THVH*DGVHQL*QFRKWR 313
CG++ A VGAL HV+ +GV KWR
Sbjct: 505 CGRLMALAVGALHVARHVNTNGVSMHELHHKWR 537
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,906,576
Number of Sequences: 59808
Number of extensions: 644025
Number of successful extensions: 2487
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2480
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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