Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00174
         (660 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens ...    31   2.8  
U01147-1|AAC50063.1|  859|Homo sapiens guanine nucleotide regula...    31   3.6  
L19704-1|AAC37519.1|  822|Homo sapiens ABR protein.                    31   3.6  
AK126882-1|BAC86734.1|  362|Homo sapiens protein ( Homo sapiens ...    31   3.6  
AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens ...    31   4.8  

>AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46559 fis, clone THYMU3040126. ).
          Length = 303

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 447 HNHL*MSSYTCEFA--YSCECECRC*HKHVTYPFAC 548
           H H+ +  Y C +   Y+C C C C H H TY   C
Sbjct: 50  HIHICIHMYMCVYTHIYACTCVCVCVHTH-TYTCIC 84


>U01147-1|AAC50063.1|  859|Homo sapiens guanine nucleotide
           regulatory protein protein.
          Length = 859

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -2

Query: 596 ETLYLFFSGYRRSWMLASKGVRHVFMLTPALTFARIRKLASVGRHLQ 456
           ET  L   G+      +S+ +RHVF+ T  L  A+++K  S G+H Q
Sbjct: 298 ETRQLVKDGFLVEVSESSRKLRHVFLFTDVLLCAKLKK-TSAGKHQQ 343


>L19704-1|AAC37519.1|  822|Homo sapiens ABR protein.
          Length = 822

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -2

Query: 596 ETLYLFFSGYRRSWMLASKGVRHVFMLTPALTFARIRKLASVGRHLQ 456
           ET  L   G+      +S+ +RHVF+ T  L  A+++K  S G+H Q
Sbjct: 261 ETRQLVKDGFLVEVSESSRKLRHVFLFTDVLLCAKLKK-TSAGKHQQ 306


>AK126882-1|BAC86734.1|  362|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44934 fis, clone BRAMY3017920, highly  similar
           to Active breakpoint cluster region-related protein. ).
          Length = 362

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -2

Query: 596 ETLYLFFSGYRRSWMLASKGVRHVFMLTPALTFARIRKLASVGRHLQ 456
           ET  L   G+      +S+ +RHVF+ T  L  A+++K  S G+H Q
Sbjct: 182 ETRQLVKDGFLVEVSESSRKLRHVFLFTDVLLCAKLKK-TSAGKHQQ 227


>AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12547 fis, clone NT2RM4000634. ).
          Length = 307

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 73  LCKWVRYSICEPVCASSYTCL 135
           LC WV   +C PVC  ++ C+
Sbjct: 5   LCVWVHICVCVPVCVGAHLCV 25


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,786,210
Number of Sequences: 237096
Number of extensions: 1642663
Number of successful extensions: 2822
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2818
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)