Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00174
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA...    30   2.4  

>AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA
           protein.
          Length = 841

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 522 YVNTGTHIRTNTQTRKCRTTFTNDYAKFSLHSWFSKLCRFFNR 394
           Y N GT+++T    RKC     +DY+ F  HS   ++ R  +R
Sbjct: 40  YTNYGTNLQTPQAARKCHYDEVDDYS-FRRHSAHGRIVRSTSR 81


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,796,752
Number of Sequences: 53049
Number of extensions: 534200
Number of successful extensions: 1276
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)